# Advances in genetics, signaling, and modeling of venous malformations

**Authors:** Komal Sagar, Elisa Boscolo

PMC · DOI: 10.3389/fcvm.2026.1770126 · Frontiers in Cardiovascular Medicine · 2026-02-06

## TL;DR

This review discusses the genetic causes, signaling pathways, and models used to study venous malformations, aiming to improve treatments for this vascular condition.

## Contribution

The paper provides a comprehensive review of genetic, signaling, and modeling advances in venous malformations.

## Key findings

- Venous malformations are mainly caused by mutations in TIE2 or PIK3CA genes.
- Current treatments like sclerotherapy and mTOR inhibitors have limited long-term success.
- In vitro, 3D, and in vivo models are advancing VM research and therapy testing.

## Abstract

Vascular anomalies are defects resulting from the abnormal development or growth of the vasculature. Among these, venous malformations (VMs) are predominantly caused by mutations in the TIE2 or PIK3CA genes, which disrupt endothelial cell morphogenesis and vessel maturation. VM lesions are typically diagnosed during infancy or childhood and often persist and enlarge throughout adulthood, causing chronic complications such as pain, deformity, and coagulopathy. Despite available treatments such as sclerotherapy and mTOR inhibitors like sirolimus, achieving complete and long-term resolution of VMs remains a significant challenge. This review examines the genetic basis of VMs, explores the underlying molecular signaling mechanisms, and compares various experimental models—including in vitro, 3D, and in vivo systems—that have advanced our understanding of VM and provided platforms for testing potential therapies. Future research should prioritize the development of more precise and personalized models to drive improved strategies and better outcomes for patients with VMs.

## Linked entities

- **Genes:** TEK (TEK receptor tyrosine kinase) [NCBI Gene 7010], PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290]
- **Chemicals:** sirolimus (PubChem CID 5284616)
- **Diseases:** coagulopathy (MONDO:0001531)

## Full-text entities

- **Genes:** Foxo1 (forkhead box O1) [NCBI Gene 56458] {aka Afxh, FKHR, Fkhr1, Foxo1a}, SEMA3F (semaphorin 3F) [NCBI Gene 6405] {aka SEMA-IV, SEMA4, SEMAK}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, Mapk1 (mitogen-activated protein kinase 1) [NCBI Gene 26413] {aka 9030612K14Rik, ERK, Erk2, MAPK2, PRKM2, Prkm1}, Slc2a1 (solute carrier family 2 (facilitated glucose transporter), member 1) [NCBI Gene 20525] {aka GT1, Glut-1, Glut1, M100200, Rgsc200}, Pik3ca (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 18706] {aka 6330412C24Rik, caPI3K, p110, p110alpha}, PDGFB (platelet derived growth factor subunit B) [NCBI Gene 5155] {aka IBGC5, PDGF-2, PDGF2, SIS, SSV, c-sis}, KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845] {aka 'C-K-RAS, C-K-RAS, CFC2, K-RAS2A, K-RAS2B, K-RAS4A}, MAP3K3 (mitogen-activated protein kinase kinase kinase 3) [NCBI Gene 4215] {aka CCM5, MAPKKK3, MEKK3}, ABL1 (ABL proto-oncogene 1, non-receptor tyrosine kinase) [NCBI Gene 25] {aka ABL, BCR-ABL, CHDSKM, JTK7, bcr/abl, c-ABL}, ITGB1 (integrin subunit beta 1) [NCBI Gene 3688] {aka CD29, FNRB, GPIIA, MDF2, MSK12, VLA-BETA}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, SEMA3A (semaphorin 3A) [NCBI Gene 10371] {aka COLL1, HH16, Hsema-I, Hsema-III, SEMA1, SEMAD}, GNAQ (G protein subunit alpha q) [NCBI Gene 2776] {aka CMAL, G-ALPHA-q, GAQ, SWS}, GNA11 (G protein subunit alpha 11) [NCBI Gene 2767] {aka FBH, FBH2, FHH2, GNA-11, HG1K, HHC2}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, Map2k1 (mitogen-activated protein kinase kinase 1) [NCBI Gene 26395] {aka MAPKK1, MEKK1, Mek1, Prkmk1}, Pecam1 (platelet/endothelial cell adhesion molecule 1) [NCBI Gene 18613] {aka Cd31, PECAM-1, Pecam}, RASA1 (RAS p21 protein activator 1) [NCBI Gene 5921] {aka CM-AVM, CMAVM, CMAVM1, GAP, PKWS, RASA}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, CCM2 (CCM2 scaffold protein) [NCBI Gene 83605] {aka C7orf22, OSM, PP10187}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, Tek (TEK receptor tyrosine kinase) [NCBI Gene 21687] {aka Cd202b, Hyk, STK1, Tie-2, Tie2}, PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290] {aka CCM4, CLAPO, CLOVE, CWS5, HMH, MCAP}, Prox1 (prospero homeobox 1) [NCBI Gene 19130] {aka A230003G05Rik, PROX-1}, Stat1 (signal transducer and activator of transcription 1) [NCBI Gene 20846] {aka 2010005J02Rik}, Acta2 (actin alpha 2, smooth muscle, aorta) [NCBI Gene 11475] {aka 0610041G09Rik, Actvs, SMAalpha, SMalphaA, a-SMA, alphaSMA}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, FGB (fibrinogen beta chain) [NCBI Gene 2244] {aka HEL-S-78p}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, Wt1 (WT1 transcription factor) [NCBI Gene 22431] {aka D630046I19Rik, Wt-1}, NODAL (nodal growth differentiation factor) [NCBI Gene 4838] {aka HTX5}, ITGA5 (integrin subunit alpha 5) [NCBI Gene 3678] {aka CD49e, FNRA, VLA-5, VLA5A}, Lyve1 (lymphatic vessel endothelial hyaluronan receptor 1) [NCBI Gene 114332] {aka 1200012G08Rik, Crsbp-1, Lyve-1, Xlkd1}, BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}, TEK (TEK receptor tyrosine kinase) [NCBI Gene 7010] {aka CD202B, GLC3E, TIE-2, TIE2, VMCM, VMCM1}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, PIK3R2 (phosphoinositide-3-kinase regulatory subunit 2) [NCBI Gene 5296] {aka MPPH, MPPH1, P85B, p85, p85-BETA, p85beta}, ANGPT1 (angiopoietin 1) [NCBI Gene 284] {aka AGP1, AGPT, AGPT-1, ANG1, HAE5}, RET (ret proto-oncogene) [NCBI Gene 5979] {aka CDHF12, CDHR16, HSCR1, MEN2A, MEN2B, MTC1}, ANGPT2 (angiopoietin 2) [NCBI Gene 285] {aka AGPT2, ANG2, LMPHM10}
- **Diseases:** coagulopathy (MESH:D001778), vascular dilation (MESH:D002311), craniofacial vascular defects (MESH:D019465), vascular defects (MESH:D057772), thrombosis (MESH:D013927), microvascular malformations (MESH:D017566), spinal and skin vascular lesions (MESH:D017445), malformations (MESH:C564254), endothelial hyperplasia (MESH:D006965), Vascular Anomalies (MESH:D020785), AVF (MESH:D001164), LIC (MESH:D004211), deformity (MESH:D009140), AVM (MESH:D001165), infantile hemangioma (MESH:C535860), Chronic pain (MESH:D059350), cancer (MESH:D009369), calcifications (MESH:D002114), LM (MESH:D008209), venous lesions (MESH:D020520), vascular disease (MESH:D014652), BBB disruption (MESH:C536830), swelling (MESH:D004487), CCM (MESH:D020786), inflammation (MESH:D007249), pain (MESH:D010146), Skin lesions (MESH:D012871), CM (OMIM:163000), intraosseous vascular malformation (MESH:C564648), VM (MESH:C563977), bleeding (MESH:D006470), malformations of the blood vessels (MESH:D009383), Vascular Malformations (MESH:D054079), brain AVMs (MESH:D002538), tumorigenesis (MESH:D063646)
- **Chemicals:** Rebastinib (MESH:C000627803), celecoxib (MESH:D000068579), Alexa-fluor conjugated (-), heparin (MESH:D006493), tamoxifen (MESH:D013629), PIP2 (MESH:D019269), sodium tetradecyl sulfate (MESH:D012981), Alpelisib (MESH:C585539), Sirolimus (MESH:D020123), bleomycin (MESH:D001761), Miransertib (MESH:C000608559), ethanol (MESH:D000431), tyrosine (MESH:D014443), aspirin (MESH:D001241)
- **Species:** Homo sapiens (human, species) [taxon 9606], Danio rerio (leopard danio, species) [taxon 7955], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** R849W, E542K, Y897H, H1047R, L914F, E545K

## Full text

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## Figures

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## References

114 references — full list in the complete paper: https://tomesphere.com/paper/PMC12921440/full.md

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Source: https://tomesphere.com/paper/PMC12921440