# Case Report: Infant with vaccine-associated paralytic poliomyelitis unveils global disparities in care for inborn errors of immunity

**Authors:** Chee Mun Chan, Elisabeth Sue Shuen Fong, Daryl Yuan Chong Yeo, Elizabeth Y. Ang, Isabella Ming Zhen Liu, Hian Tat Ong, Si Min Chan, Hui-Lin Chin, Frances Shi Hui Yeap, Chee Kwang Kee, Teresa Shu Zhen Tan, Nicholas Beng Hui Ng, Youjia Zhong, Jeremy Bingyuan Lin, Lydia Su Yin Wong

PMC · DOI: 10.3389/fimmu.2026.1751423 · Frontiers in Immunology · 2026-02-06

## TL;DR

A case of a child with a rare immune disorder and vaccine-related paralysis highlights global healthcare disparities and the need for better diagnostics and vaccination policies.

## Contribution

This case report highlights global disparities in diagnosing and managing inborn errors of immunity and the risks of using live vaccines in such cases.

## Key findings

- Delayed diagnosis of SCID in a child led to vaccine-associated paralytic poliomyelitis.
- Lack of newborn screening and continued use of oral polio vaccine in low-resource settings increases VAPP risk.
- Transition to inactivated polio vaccine and improved diagnostics are critical for preventing complications.

## Abstract

Severe combined immunodeficiency (SCID) is a life-threatening inborn error of immunity (IEI) that is potentially curable when diagnosed early but is associated with high morbidity and mortality when recognition is delayed. In settings without universal newborn screening (NBS), and where vaccination programs rely heavily on live vaccines, affected infants are at risk of preventable complications.

We report an Indonesian girl, the first child of non-consanguineous parents, who at the age of three months, developed a generalized maculopapular rash, followed by febrile encephalopathy with acute flaccid paralysis and hepatomegaly at four months of age. Investigations revealed pan-hypogammaglobulinemia (IgG <1.09 g/L, IgA <0.05 g/L, IgM 0.06 g/L) and marked eosinophilia (7554 cells/uL). On transfer to Singapore, detailed immunophenotyping revealed T cell lymphocytopenia with the vast majority being 99.3% CD45RO+ on CD3+CD4+ cells, and absent B cells. The diagnosis of SCID with Omenn syndrome was made, with genetic analysis revealing compound heterozygosity for pathogenic RAG1 variants. As the child received oral polio vaccine (OPV) at day 8 of life, vaccine-associated paralytic poliomyelitis (VAPP) was suspected, which was confirmed with positive enterovirus PCR in the cerebral spinal fluid; Sabin-like poliovirus serotype 1 was isolated from stool. Hematopoietic stem cell transplantation (HSCT) was discussed but the family opted for supportive palliative care. The child died of a febrile illness at 8 months of age.

Although IEI was initially suspected, the use of limited flow cytometric diagnostic evaluation delayed the definitive diagnosis in the child. The lack of NBS for SCID, together with the continued usage of OPV in the routine childhood vaccination program in most lower to middle income countries is the perfect storm for VAPP in children born with IEIs in these settings. This case highlights that 1) there is an urgent need to strengthen diagnostic capabilities in resource-limited settings, 2) the transition from OPV to inactivated polio vaccine (IPV) is a public health priority, and 3) there are significant barriers to the implementation of SCID NBS in Southeast Asia. Addressing these systemic gaps is critical to improve survival outcomes for children with severe but treatable IEIs.

## Linked entities

- **Genes:** RAG1 (recombination activating 1) [NCBI Gene 5896]
- **Diseases:** Severe combined immunodeficiency (MONDO:0015974), Omenn syndrome (MONDO:0011338)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** NCAM1 (neural cell adhesion molecule 1) [NCBI Gene 4684] {aka CD56, MSK39, NCAM}, RAG2 (recombination activating 2) [NCBI Gene 5897] {aka RAG-2}, CD79A (CD79a molecule) [NCBI Gene 973] {aka IGA, IGAlpha, MB-1, MB1}, RAG1 (recombination activating 1) [NCBI Gene 5896] {aka RAG-1, RNF74}, IGHE (immunoglobulin heavy constant epsilon) [NCBI Gene 3497] {aka IgE}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, FCGR3A (Fc gamma receptor IIIa) [NCBI Gene 2214] {aka CD16-II, CD16A, FCG3, FCGR3, FCRIIIA, FcGRIIIA}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, CMPK1 (cytidine/uridine monophosphate kinase 1) [NCBI Gene 51727] {aka CK, CMK, CMPK, UMK, UMP-CMPK, UMPK}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}
- **Diseases:** Wiskott Aldrich Syndrome (MESH:D014923), hepatosplenomegaly (MESH:C535727), T-cell lymphopenia (MESH:D008231), flaccid paralysis (MESH:C000629404), head lag (MESH:D006258), NK (MESH:D054066), Meningitis (MESH:D008580), T-B (MESH:D006509), polioencephalitis (MESH:D014899), eosinophilia (MESH:D004802), infectious encephalitis (MESH:D000069544), T-cell impairment (MESH:C536780), inflammation (MESH:D007249), pain (MESH:D010146), Influenza B (MESH:D007251), genetic disease (MESH:D030342), febrile illness (MESH:D005334), B cell lymphocytopenia (MESH:D015448), PID (MESH:D000081207), abnormal involuntary tongue movements (MESH:D014060), combined immunodeficiencies (MESH:D053632), lymphadenopathy (MESH:D008206), erythematous rash (MESH:D005076), basal ganglia and lower motor neuron (anterior horn cell) injury (MESH:D016472), pan-hypogammaglobulinemia (MESH:D000361), febrile encephalopathy (MESH:D000071072), neurological disease (MESH:D020271), paralysis (MESH:D010243), T cell lymphocytopenia (MESH:C536783), chronic poliovirus encephalomyelitis (MESH:D004679), Encephalitis (MESH:D004660), infection (MESH:D007239), IEI (MESH:D007154), pleocytosis (MESH:D007964), humoral defect (MESH:C562390), NBS (MESH:D006475), C (OMIM:211750), neurological damage (MESH:D020196), Brain involvement (MESH:D001927), immunodeficiencies (MESH:D007153), athetoid (MESH:D001264), death (MESH:D003643), hepatomegaly (MESH:D006529), hypereosinophilic syndrome (MESH:D017681), immune deficiency or dysregulation (OMIM:614878), H-LC (MESH:D000848), erythroderma (MESH:D003873), erythema (MESH:D004890), atopic dermatitis (MESH:D003876), Omenn syndrome (MESH:D016511), aneuploidy (MESH:D000782), infectious (MESH:D003141), BCG (MESH:D001176), bacterial (MESH:D001424), Dyskinesia (MESH:D004409), B- and NK-cell defects (MESH:D016393), areflexia (MESH:D000071699), papules (MESH:D000169), IPV (MESH:D011051), oral dyskinesia (MESH:D020820)
- **Chemicals:** lactate (MESH:D019344), C (MESH:D002244), ammonia (MESH:D000641), trihexyphenidyl (MESH:D014282), methylprednisolone (MESH:D008775), trimethoprim (MESH:D014295), amino acids (MESH:D000596), acyl carnitine (MESH:C116917), Bacille Calmette (-), prednisolone (MESH:D011239), Ciclosporin (MESH:D016572), itraconazole (MESH:D017964), trimethoprim-sulfamethoxazole (MESH:D015662)
- **Species:** Mycoplasmoides pneumoniae (Filterable agent of primary atypical pneumonia, species) [taxon 2104], Escherichia coli K1 (strain) [taxon 1392869], Enterovirus (genus) [taxon 12059], Human respirovirus 3 (no rank) [taxon 11216], Chlamydia pneumoniae (species) [taxon 83558], Human alphaherpesvirus 1 (Herpes simplex virus type 1, no rank) [taxon 10298], Parainfluenza virus Type 4 [taxon 11203], Human alphaherpesvirus 3 (Varicella-zoster virus, no rank) [taxon 10335], Streptococcus pneumoniae (species) [taxon 1313], Bordetella parapertussis (species) [taxon 519], Parainfluenza virus Type 2 [taxon 1979160], Gammacoronavirus (genus) [taxon 694013], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Bordetella pertussis (species) [taxon 520], Human respirovirus 1 (no rank) [taxon 12730], Adenoviridae (family) [taxon 10508], Metapneumovirus (genus) [taxon 162387], Enterovirus C (no rank) [taxon 138950], Homo sapiens (human, species) [taxon 9606], Respiratory syncytial virus (no rank) [taxon 12814], Listeria monocytogenes (species) [taxon 1639], Neisseria meningitidis (species) [taxon 487], Human betaherpesvirus 6 (species) [taxon 10368], Cytomegalovirus (genus) [taxon 10358], Parechovirus A (no rank) [taxon 1803956], Human alphaherpesvirus 2 (no rank) [taxon 10310], Streptococcus agalactiae (species) [taxon 1311]
- **Mutations:** c.705dup, p.Arg559Trp, c.1675A>T, [p.Leu236Thrfs*6]

## Full text

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## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920594/full.md

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Source: https://tomesphere.com/paper/PMC12920594