# Modified Dachengqi Decoction ameliorates sepsis-induced lung injury via the gut microbiota-bile acid axis

**Authors:** Lulu Wu, Weihang Peng, Ya Li, Liyuan Yu, Peiying Huang, Ye Ye, Yuchao Feng, Bojun Chen, Li Chen

PMC · DOI: 10.3389/fcimb.2026.1661639 · Frontiers in Cellular and Infection Microbiology · 2026-02-06

## TL;DR

Modified Dachengqi Decoction (MDD) helps reduce lung damage in sepsis by changing gut bacteria and bile acids, which lowers inflammation and improves survival in mice.

## Contribution

This study reveals a novel mechanism by which MDD protects against sepsis-induced lung injury through the gut microbiota-bile acid axis and FXR activation.

## Key findings

- MDD improved survival and lung function in LPS-induced sepsis models.
- MDD altered gut microbiota composition, reducing Parabacteroides and Bacteroides.
- MDD modulated bile acid levels and inhibited TLR4/NF-κB/JNK pathways and NETs formation.

## Abstract

Sepsis-induced acute lung injury (SI-ALI) is associated with high mortality. The gut microbiota-bile acid axis plays a critical role in regulating host inflammatory responses; however, the mechanism of action of traditional Chinese medicine (TCM) compounds targeting this axis remains unclear.

This study aimed to systematically evaluate the protective effects of Modified DaChengqi Decoction (MDD) against lipopolysaccharide (LPS)-induced SI-ALI and to elucidate its underlying mechanism in modulating inflammation and neutrophil extracellular traps (NETs) through the regulation of gut microbiota and bile acid metabolism.

An LPS-induced mouse model of SI-ALI was established. Mice were orally administered MDD, and 72−h survival rate, lung function, histopathology, and inflammatory cytokine levels were assessed. Fecal 16S rRNA sequencing and targeted bile acid metabolomics were combined to analyze changes in the microbiota and metabolites. Network pharmacology was employed to screen key targets, followed by experimental validation using Western blotting, immunohistochemistry, and ELISA to confirm candidate pathways.

Compared with the model group, MDD significantly improved survival and lung function, alleviated pulmonary inflammation and vascular permeability. Microbiomic analysis revealed that MDD downregulated the abundance of Parabacteroides and Bacteroides. Targeted metabolomics showed that MDD markedly altered the levels of several primary and secondary bile acids, mainly including glycoursodeoxycholic acid (GUDCA), taurochenodesoxycholic acid (TCDCA), chenodeoxycholic acid (CDCA), and taurocholic acid (TCA). Molecular validation demonstrated that the nuclear receptor FXR was significantly upregulated, while the TLR4 and downstream MYD88-NF−κB/JNK signaling pathways were inhibited. Additionally, the expression of PAD4 and CitH3 as well as NETs formation were reduced.

MDD can alleviate LPS-induced SI-ALI by modulating the gut microbiota-bile acid metabolism, activating FXR, and thereby suppressing the TLR4/MYD88−mediated inflammatory cascade and NETs generation.

## Linked entities

- **Genes:** TLR4 (toll like receptor 4) [NCBI Gene 7099], MYD88 (MYD88 innate immune signal transduction adaptor) [NCBI Gene 4615], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790], MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599], NR1H4 (nuclear receptor subfamily 1 group H member 4) [NCBI Gene 9971], PADI4 (peptidyl arginine deiminase 4) [NCBI Gene 23569]
- **Chemicals:** glycoursodeoxycholic acid (PubChem CID 93353), taurochenodesoxycholic acid (PubChem CID 387316), chenodeoxycholic acid (PubChem CID 10133), taurocholic acid (PubChem CID 6675)
- **Diseases:** acute lung injury (MONDO:0006502)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Cdh5 (cadherin 5) [NCBI Gene 12562] {aka 7B4, Cd144, VE-Cad, VECD, VEcad, Vec}, Cybb (cytochrome b-245, beta polypeptide) [NCBI Gene 13058] {aka CGD91-phox, Cgd, Cyd, Nox2, gp91-1, gp91phox}, Jun (Jun proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 16476] {aka AP-1, Junc, c-jun}, Il1b (interleukin 1 beta) [NCBI Gene 16176] {aka IL-1beta, Il-1b}, Il1a (interleukin 1 alpha) [NCBI Gene 16175] {aka Il-1a}, Nr4a1 (nuclear receptor subfamily 4, group A, member 1) [NCBI Gene 15370] {aka GFRP1, Gfrp, Hbr-1, Hbr1, Hmr, N10}, Mapk8 (mitogen-activated protein kinase 8) [NCBI Gene 26419] {aka JNK, JNK1, Prkm8, SAPK1}, Tnf (tumor necrosis factor) [NCBI Gene 21926] {aka DIF, TNF-a, TNF-alpha, TNFSF2, TNFalpha, Tnfa}, Mpo (myeloperoxidase) [NCBI Gene 17523] {aka mKIAA4033}, Pla2g2a (phospholipase A2, group IIA (platelets, synovial fluid)) [NCBI Gene 18780] {aka EF, Mom1, Pla2, sPLA2, sPla2-IIA}, Gpr34 (G protein-coupled receptor 34) [NCBI Gene 23890] {aka Lypsr1}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Padis4 (MMTV LTR integration site 4) [NCBI Gene 110072] {aka Pad4}, Cort (cortistatin) [NCBI Gene 12854] {aka CST, PCST}, Hif1a (hypoxia inducible factor 1, alpha subunit) [NCBI Gene 15251] {aka HIF-1-alpha, HIF1-alpha, HIF1alpha, MOP1, bHLHe78}, Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 216799] {aka AGTAVPRL, AII/AVP, Cias1, FCAS, FCU, MWS}, Tlr4 (toll-like receptor 4) [NCBI Gene 21898] {aka Lps, Ly87, Ran/M1, Rasl2-8}, Sirt2 (sirtuin 2) [NCBI Gene 64383] {aka 5730427M03Rik, SIR2L2, Sir2l}, Vcam1 (vascular cell adhesion molecule 1) [NCBI Gene 22329] {aka CD106, Vcam-1}, Nr1i2 (nuclear receptor subfamily 1, group I, member 2) [NCBI Gene 18171] {aka PXR, PXR.1, PXR.2, PXR1, SXR, mPXR}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, H3c7 (H3 clustered histone 7) [NCBI Gene 260423] {aka H3.2-221, H3c13, H3c14, H3c15, H3c2, H3c3}, Nr1h4 (nuclear receptor subfamily 1, group H, member 4) [NCBI Gene 20186] {aka Fxr, HRR1, RIP14, Rxrip14}, Rela (Rela proto-oncogene, NFKB subunit) [NCBI Gene 19697] {aka p65, p65 NF-kappa B, p65 NFkB}, Il6 (interleukin 6) [NCBI Gene 16193] {aka Il-6}, Slc12a4 (solute carrier family 12, member 4) [NCBI Gene 20498] {aka KCC1, RBCKCC1}, Elane (elastase, neutrophil expressed) [NCBI Gene 50701] {aka Ela2, F430011M15Rik, NE}, Sirt1 (sirtuin 1) [NCBI Gene 93759] {aka SIR2L1, Sir2, Sir2a, Sir2alpha}, Myd88 (myeloid differentiation primary response gene 88) [NCBI Gene 17874]
- **Diseases:** hypertension (MESH:D006973), PCOS (MESH:D011085), inflammation (MESH:D007249), complications (MESH:D008107), injury (MESH:D014947), metabolic syndrome (MESH:D024821), thrombosis (MESH:D013927), endotoxemia (MESH:D019446), cytotoxic (MESH:D064420), SI-ALI (MESH:D055371), Pulmonary edema (MESH:D011654), endothelial injury (MESH:D057772), lung injuries (MESH:D055370), acute pancreatitis (MESH:D010195), edema (MESH:D004487), non-alcoholic fatty liver disease (MESH:D065626), infection (MESH:D007239), bile acid metabolic (MESH:C567652), cancer (MESH:D009369), respiratory function impairment (MESH:D012120), pulmonary and (MESH:D008171), COVID-19.Inhibition (MESH:D000086382), endothelial dysfunction (MESH:D014652), dysbiosis (MESH:D064806), pulmonary inflammatory (MESH:D016726), ALI.MDD (MESH:C564098), pulmonary inflammation (MESH:D011014), bacterial infection (MESH:D001424), NETs (MESH:C536657), neonatal cholestasis (MESH:D007232), IBD (MESH:D015212), obesity (MESH:D009765), immunothrombosis (MESH:D000090882), organ damage (MESH:D000092124), Organ Failure (MESH:D009102), autoimmune diseases (MESH:D001327), tissue injury (MESH:D017695), alopecia areata (MESH:D000506), hypoxia (MESH:D000860), Sepsis (MESH:D018805), metabolic disorder (MESH:D008659), airway obstruction (MESH:D000402), intestinal injury (MESH:D007410), psoriasis (MESH:D011565), ARDS (MESH:D012128), septic (MESH:D001170), acute (MESH:D000208)
- **Chemicals:** Forsythiaside (MESH:C058049), formic acid (MESH:C030544), hematoxylin (MESH:D006416), batatasin III (MESH:C487941), paraffin (MESH:D010232), Ginsenoside (MESH:D036145), H2O2 (MESH:D006861), CA7S (-), metal (MESH:D008670), H&amp;E (MESH:D006371), DCA (MESH:D003840), Bile acids (MESH:D001647), saline (MESH:D012965), Scutellarin (MESH:C484876), Linoleic acid (MESH:D019787), methanol (MESH:D000432), CDCA (MESH:D002635), ginsenoside Rk3 (MESH:C472075), acetonitrile (MESH:C032159), fatty acids (MESH:D005227), carbohydrate (MESH:D002241), Emodin (MESH:D004642), Ginsenoside Rg3 (MESH:C097367), Honokiol (MESH:C005499), DEX (MESH:D003907), butyrate (MESH:D002087), GUDCA (MESH:C024033), rhamnose (MESH:D012210), HDCA (MESH:C010471), anthrones (MESH:D000873), Quercetin (MESH:D011794), EDTA (MESH:D004492), paraformaldehyde (MESH:C003043), LPS (MESH:D008070), BHT (MESH:D002084), agarose (MESH:D012685), TCA (MESH:D013656), water (MESH:D014867), UDCA (MESH:D014580), phenylpyruvate (MESH:C031606), citrate (MESH:D019343), DAPI (MESH:C007293), Anthraquinones (MESH:D000880), Amygdalin (MESH:D000678), SCFAs (MESH:D005232), Baicalin (MESH:C038044), Myristic acid (MESH:D019814), Flavones (MESH:D047309), Rhein (MESH:C020491), PBS (MESH:D007854), Emodin-8-glucoside (MESH:C442642), eosin (MESH:D004801), 4-aminobutyric acid (MESH:D005680), DAB (MESH:C000469), isopropanol (MESH:D019840), SDS (MESH:D012967), acetic acid (MESH:D019342)
- **Species:** Rheum palmatum (species) [taxon 137221], Candida albicans (species) [taxon 5476], Bletilla striata (species) [taxon 78707], Scutellaria baicalensis (Baikal skullcap, species) [taxon 65409], Magnolia (genus) [taxon 3402], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Bacteroides (genus) [taxon 816], Parabacteroides distasonis (species) [taxon 823], Rheum rhabarbarum (garden rhubarb, species) [taxon 3621], Panax notoginseng (notoginseng, species) [taxon 44586], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Forsythia suspensa (species) [taxon 126418], Prunus dulcis (almond, species) [taxon 3755], Actinomycetota (actinobacteria, phylum) [taxon 201174], Panax ginseng (Asiatic ginseng, species) [taxon 4054], Prunus (genus) [taxon 3754]
- **Mutations:** GCA-C13
- **Cell lines:** /6 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_5985)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12920581/full.md

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12920581/full.md

## References

93 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920581/full.md

---
Source: https://tomesphere.com/paper/PMC12920581