# Deciphering the interplay between fruit-associated metabolites and bacterial communities across four distinct mango cultivars

**Authors:** Chuanfang Zhang, Rong Wan, Siwei Nong, Wei Huang, Salim S. Al-Rejaie, Fengzhen Wang, Zhengzhou Yang, Zhengjie Zhu, Mohamed Mohany

PMC · DOI: 10.3389/fpls.2026.1754579 · Frontiers in Plant Science · 2026-02-06

## TL;DR

This study explores how different mango varieties influence their fruit's chemical makeup and bacterial communities, revealing unique interactions that affect fruit quality and health.

## Contribution

The study identifies cultivar-specific correlations between metabolites and bacterial taxa in mango fruits, offering new insights into their interplay.

## Key findings

- Distinct metabolic profiles and microbiota were found in four mango cultivars.
- Specific bacterial taxa correlated with metabolites linked to fruit development and stress resistance.
- The findings highlight the role of mango cultivars in shaping fruit-specific microbiomes and metabolites.

## Abstract

Mango (Mangifera indica L.) fruit characteristics and health are strongly determined by their biochemical profiles and fruit-associated microbiome composition. However, the cultivar-specific interplay between the mango fruit metabolome and microbiome remains elusive. Here, we tracked differential changes in fruit metabolites and bacterial community composition in four economically important mango cultivars in China: Qingmang (QM), Yumang (YM), Tainong (TN), and Aomang (AM). Using untargeted metabolomics with liquid chromatography-mass spectrometry and high-throughput amplicon sequencing of bacterial 16S rRNA, we identified distinct metabolic profiles and the enrichment of a specific subset of microbiota unique to each cultivar. Different metabolites associated with nitrogen and carbon metabolism, biosynthesis of amino acids, secondary metabolites, and flavonoids were differentially abundant in the four mango cultivars. These classes of metabolites have been previously linked to fruit development, color, antioxidant capacity, and stress resistance. Importantly, significant positive correlations were found between specific bacterial taxa, such as Alcanivorax, Alistipes, Curtobacterium, Rikenella, Thiopseudomonas, Rikenella, and Vogesella and the accumulation of the metabolites ornithine, L-arginine, tricetin, casoxin D, mhppa sulfate, sorbitan palmitate, meconic acid and rengyoside B. These results indicate the critical role of mango cultivars in shaping the fruit-specific microbiomes and metabolites. Our findings provide a foundational understanding of mango fruit holobionts and offer novel insights into metabolic and microbial networks for developing strategies to enhance fruit quality and postharvest management.

## Linked entities

- **Chemicals:** ornithine (PubChem CID 389), L-arginine (PubChem CID 232), tricetin (PubChem CID 5281701), casoxin D (PubChem CID 3015907), mhppa sulfate (PubChem CID 187488), sorbitan palmitate (PubChem CID 16212480), meconic acid (PubChem CID 10347)
- **Species:** Alcanivorax (taxon 59753), Alistipes (taxon 239759), Curtobacterium (taxon 2034), Rikenella (taxon 28138), Thiopseudomonas (taxon 1654787), Vogesella (taxon 57739)

## Full-text entities

- **Diseases:** fungal (MESH:D009181), intestinal infections (MESH:D007410), inflammatory (MESH:D007249), diabetic (MESH:D003920)
- **Chemicals:** aromatic compounds (-), Ornithine (MESH:D009952), 6'-O-galloyl salidroside (MESH:C000632231), obacunone (MESH:C067207), benzoic acids (MESH:D001565), dendronobiloside B (MESH:C438415), CDP-glucose (MESH:C073881), UDP-glucose (MESH:D014532), amino acids (MESH:D000596), Casoxin D (MESH:C097580), 4-methoxyglucobrassicin (MESH:C403468), phenylalanine (MESH:D010649), glucoraphanin (MESH:C119494), fatty acids (MESH:D005227), L-Arginine (MESH:D001120), carbohydrate (MESH:D002241), meconic acid (MESH:C010603), lignin (MESH:D008031), cremeomycin (MESH:C094831), polyphenols (MESH:D059808), convallatoxin (MESH:C000505), protocatechuic acids (MESH:C009091), glutathione (MESH:D005978), beta-carotene (MESH:D019207), lipids (MESH:D008055), chloroform (MESH:D002725), sesquiterpenoids (MESH:D012717), purine (MESH:C030985), violacein (MESH:C063155), anthocyanin (MESH:D000872), tryptophan (MESH:D014364), flavonoid (MESH:D005419), glucose (MESH:D005947), quinine (MESH:D011803), fat (MESH:D005223), 3,5-dinitrosalicylic acid (MESH:C027011), methanol (MESH:D000432), Acid (MESH:D000143), sugars (MESH:D000073893), ammonium formate (MESH:C030544), kaltostat (MESH:D000464), pectin (MESH:D010368), nitrogen (MESH:D009584), pomiferin (MESH:C474837), acetonitrile (MESH:C032159), lipoyllysine (MESH:C067769), carbon (MESH:D002244), tyrosine (MESH:D014443), water (MESH:D014867), tricetin (MESH:C469689), carotenoid (MESH:D002338), sorbitan palmitate (MESH:C061705), alkaloids (MESH:D000470), glucosinolate (MESH:D005961), mangiferin (MESH:C013592), VOCs (MESH:D055549)
- **Species:** Aurantisolimonas (genus) [taxon 2125991], Odoribacter (genus) [taxon 283168], Corynebacterium (genus) [taxon 1716], Terriglobia (class) [taxon 204432], Duganella (genus) [taxon 75654], Rothia (genus) [taxon 508215], Bilophila (genus) [taxon 35832], Diaphorobacter (genus) [taxon 238749], Cloacibacterium (genus) [taxon 501783], Aquabacterium (genus) [taxon 92793], Enterorhabdus (genus) [taxon 580024], Alistipes (genus) [taxon 239759], Haliangium (genus) [taxon 162027], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Candidatus Neoarthromitus (genus) [taxon 49082], Amaricoccus (genus) [taxon 56999], Rikenella (genus) [taxon 28138], Homo sapiens (human, species) [taxon 9606], Parasutterella (genus) [taxon 577310], Oscillibacter (genus) [taxon 459786], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Vogesella (genus) [taxon 57739], Alcanivorax (genus) [taxon 59753], Flectobacillus (genus) [taxon 101], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Aquicella (genus) [taxon 254245], Acidiphilium (genus) [taxon 522], Burkholderia pyrrocinia (species) [taxon 60550], Geodermatophilus (genus) [taxon 1860], Bacteroidia (class) [taxon 200643], Larkinella (genus) [taxon 332157], Komagataeibacter (genus) [taxon 1434011], Lachnoclostridium (genus) [taxon 1506553], Prunus persica (peach, species) [taxon 3760], Lachnospiraceae (family) [taxon 186803], Janthinobacterium (genus) [taxon 29580], Clostridioides (genus) [taxon 1870884], Rubellimicrobium (genus) [taxon 295418], Haemophilus (genus) [taxon 724], Actinomyces (genus) [taxon 1654], Curtobacterium (genus) [taxon 2034], Jiella (genus) [taxon 1775688], Mangifera indica (mango, species) [taxon 29780], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Enhydrobacter (genus) [taxon 212791], Thiopseudomonas (genus) [taxon 1654787], Actinomycetota (actinobacteria, phylum) [taxon 201174]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12920474/full.md

## References

69 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920474/full.md

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Source: https://tomesphere.com/paper/PMC12920474