# ESRP1 drives epithelial-mesenchymal transition by activating EPAC-RAP1A signaling axis

**Authors:** Ruixin Qi, Jiaqi Wang, Guocang Cheng, Tingting Zhao, Zhengyu Hu, Jialin Yu, Yuanyuan Jia, Juan Chen

PMC · DOI: 10.3389/fmed.2026.1734619 · Frontiers in Medicine · 2026-02-06

## TL;DR

This study shows that ESRP1 promotes lung disease by triggering a key cell transformation process through a specific signaling pathway.

## Contribution

The study identifies ESRP1 as a novel upstream regulator of EMT via the EPAC-RAP1A signaling axis in IPF.

## Key findings

- ESRP1 is significantly upregulated in alveolar epithelial cells during IPF.
- ESRP1 promotes EMT by activating the EPAC-RAP1A signaling pathway.
- ESRP1 interacts with EPAC and RAP1A, establishing an upstream regulatory role.

## Abstract

Idiopathic pulmonary fibrosis (IPF) is a fatal lung disease characterized by epithelial-mesenchymal transition (EMT) as a key pathological feature. The molecular mechanism of EMT is not fully understood. Hence, the current study aimed to investigate the pathogenesis of EMT, which focus on the function of Epithelial Splicing Regulatory Protein 1 (ESRP1) in regulating EMT.

The present study utilized bleomycin (BLM) to establish mouse models of IPF. Then, single-cell RNA sequencing (scRNA-seq) of entire lung tissue was employed to delineate transcriptional alterations in epithelial cells and to nominate prospective regulators of EMT. The target gene was subsequently validated in vivo and in vitro by qPCR, western blot, and immunofluorescence. Furthermore, an EMT model was established in TGF-β1–treated MLE-12 alveolar epithelial cells. Lentivirus or siRNA was hired to modulate the expression of target gene and elucidate its mechanistic contribution to EMT.

ScRNA-seq revealed marked up-regulation of the ESRP1 in alveolar epithelial cells compared with PBS-treated controls. Subsequent mechanistic interrogation in primary and MLE-12 alveolar epithelial cells demonstrated that knockdown of ESRP1 suppressed, whereas its overexpression potentiated, the expression of Epac, Rap1a, and N-cad which were key effectors of EMT. Importantly, Co-IP (Co-Immunoprecipitation) showed that there was interaction between ESRP1, Epac, and Rap1a. Silencing of either Epac or Rap1a did not reciprocally alter ESRP1 expression, confirming an upstream regulatory hierarchy.

Our findings demonstrate that ESRP1 upregulation in alveolar epithelial cells drives IPF progression by promoting EMT via the Epac–Rap1a axis.

## Linked entities

- **Genes:** ESRP1 (epithelial splicing regulatory protein 1) [NCBI Gene 54845], RAPGEF3 (Rap guanine nucleotide exchange factor 3) [NCBI Gene 10411], RAP1A (RAP1A, member of RAS oncogene family) [NCBI Gene 5906], CDH2 (cadherin 2) [NCBI Gene 1000]
- **Chemicals:** bleomycin (PubChem CID 5360373)
- **Diseases:** idiopathic pulmonary fibrosis (MONDO:0800029), IPF (MONDO:0800504)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Fgfr2 (fibroblast growth factor receptor 2) [NCBI Gene 14183] {aka Bek, Fgfr-2, Fgfr-7, Fgfr2b, Fgfr7, KGFR}, Lrpap1 (low density lipoprotein receptor-related protein associated protein 1) [NCBI Gene 16976] {aka HBP44, RAP}, ESRP1 (epithelial splicing regulatory protein 1) [NCBI Gene 54845] {aka DFNB109, RBM35A, RMB35A}, Cdh2 (cadherin 2) [NCBI Gene 12558] {aka CDHN, N-CAD, Ncad}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, CAT (catalase) [NCBI Gene 847], Camp (cathelicidin antimicrobial peptide) [NCBI Gene 12796] {aka CAP18, CLP, Cnlp, Cramp, FALL39, MCLP}, CDH2 (cadherin 2) [NCBI Gene 1000] {aka ACOGS, ADHD8, ARVD14, CD325, CDHN, CDw325}, Cort (cortistatin) [NCBI Gene 12854] {aka CST, PCST}, Tgfb1 (transforming growth factor, beta 1) [NCBI Gene 21803] {aka TGF-beta1, TGFbeta1, Tgfb, Tgfb-1}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, EPCAM (epithelial cell adhesion molecule) [NCBI Gene 4072] {aka Ber-Ep4, BerEp4, DIAR5, EGP-2, EGP314, EGP40}, Pecam1 (platelet/endothelial cell adhesion molecule 1) [NCBI Gene 18613] {aka Cd31, PECAM-1, Pecam}, Col1a1 (collagen, type I, alpha 1) [NCBI Gene 12842] {aka Col1a-1, Cola-1, Cola1, Mov-13, Mov13}, Vim (vimentin) [NCBI Gene 22352], Apln (apelin) [NCBI Gene 30878] {aka 6030430G11Rik, Apel}, Epcam (epithelial cell adhesion molecule) [NCBI Gene 17075] {aka CD326, EGP, EGP-2, Egp314, Ep-CAM, EpCAM1}, RAPGEF4 (Rap guanine nucleotide exchange factor 4) [NCBI Gene 11069] {aka CAMP-GEFII, CGEF2, EPAC, EPAC 2, EPAC2, Nbla00496}, Acta2 (actin alpha 2, smooth muscle, aorta) [NCBI Gene 11475] {aka 0610041G09Rik, Actvs, SMAalpha, SMalphaA, a-SMA, alphaSMA}, Cdh1 (cadherin 1) [NCBI Gene 12550] {aka ARC-1, E-cad, Ecad, L-CAM, UVO, Um}, Zeb1 (zinc finger E-box binding homeobox 1) [NCBI Gene 21417] {aka 3110032K11Rik, AREB6, BZP, MEB1, Nil2, TCF-8}, RAPGEF3 (Rap guanine nucleotide exchange factor 3) [NCBI Gene 10411] {aka CAMP-GEFI, EPAC, EPAC1, HSU79275, bcm910}, Cd44 (CD44 antigen) [NCBI Gene 12505] {aka HERMES, Ly-24, Pgp-1}, Rap1a (Rap1a member of RAS oncogene family) [NCBI Gene 109905] {aka G-22K, Krev-1, Rap1}, Rapgef3 (Rap guanine nucleotide exchange factor (GEF) 3) [NCBI Gene 223864] {aka 2310016P22Rik, 9330170P05Rik, Epac, Epac1}, RAP1A (RAP1A, member of RAS oncogene family) [NCBI Gene 5906] {aka C21KG, G-22K, KREV-1, KREV1, RAP1, SMGP21}, Fgf2 (fibroblast growth factor 2) [NCBI Gene 14173] {aka Fgf-2, Fgf2a, Fgfb, bFGF}, Ctnnd1 (catenin delta 1) [NCBI Gene 12388] {aka Catns, Ctnnd, P120, mKIAA0384}, Tjp1 (tight junction protein 1) [NCBI Gene 21872] {aka ZO1}, Fn1 (fibronectin 1) [NCBI Gene 14268] {aka E330027I09, Fn, Fn-1}, Enah (ENAH actin regulator) [NCBI Gene 13800] {aka Mena, NDPP-1, Ndpp1, WBP8}, Esrp1 (epithelial splicing regulatory protein 1) [NCBI Gene 207920] {aka 2210008M09Rik, A630065D16, Rbm35a}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}
- **Diseases:** IPF (MESH:D054990), alveolar epithelial injury (MESH:D009375), tissue injury (MESH:D017695), interstitial lung disease (MESH:D017563), pulmonary fibrosis (MESH:D011658), breast cancer (MESH:D001943), lung function (MESH:D055370), lung cancer (MESH:D008175), lung disease (MESH:D008171), cancer (MESH:D009369), fibrotic diseases (MESH:D004194), inflammatory (MESH:D007249), fibrosis (MESH:D005355), weight gain (MESH:D015430), alveolar hemorrhage (MESH:D006470)
- **Chemicals:** pirfenidone (MESH:C093844), Lipofectamine (MESH:C086724), sodium citrate (MESH:D000077559), puromycin (MESH:D011691), haematoxylin (MESH:D006416), Hydroxyproline (MESH:D006909), hydrogen peroxide (MESH:D006861), 21045-1-AP (-), H&amp;E (MESH:D006371), 4',6-Diamidino-2-Phenylindole (MESH:C007293), nintedanib (MESH:C530716), eosin (MESH:D004801), 3'-3-diaminobenzidine (MESH:D015100), sphingolipid (MESH:D013107), PBS (MESH:D007854), PVDF (MESH:C024865), polybrene (MESH:D006583), paraformaldehyde (MESH:C003043), agarose (MESH:D012685), -AP (MESH:D000667), CO2 (MESH:D002245), pentobarbital sodium (MESH:D010424), F12 (MESH:C007782), Paraffin (MESH:D010232), saline (MESH:D012965), biotin (MESH:D001710), TSA (MESH:C481298), BLM (MESH:D001761), TRIzol (MESH:C411644)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** P2179S
- **Cell lines:** BLMd21 — Mus musculus (Mouse), Hybridoma (CVCL_C5HW), /6J — Homo sapiens (Human), Cutaneous melanoma, Cancer cell line (CVCL_W797), MLE-12 — Mus musculus (Mouse), Transformed cell line (CVCL_3751)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12920467/full.md

## References

37 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920467/full.md

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Source: https://tomesphere.com/paper/PMC12920467