# CDHR1 variants in a Japanese family with inherited retinal dystrophy and intrafamilial phenotypic variability

**Authors:** Toshiaki Hirakata, Dan Gao, Minami Oshima, Fumihiro Hara, Shintaro Nakao, Akira Murakami

PMC · DOI: 10.3389/fopht.2026.1736277 · Frontiers in Ophthalmology · 2026-02-06

## TL;DR

A Japanese family with inherited retinal dystrophy shows varied symptoms despite shared CDHR1 gene variants, highlighting complex genetic effects.

## Contribution

Identifies CDHR1 variants in a family with IRD and demonstrates significant intrafamilial phenotypic variability.

## Key findings

- Three brothers with IRD showed different retinal degeneration patterns despite shared CDHR1 variants.
- CDHR1 variants c.748C>A and c.2027T>A were identified, but their phenotypic implications remain complex.
- The study emphasizes the need for cautious interpretation of genetic results in CDHR1-related retinal disease.

## Abstract

To report a Japanese family with inherited retinal dystrophy (IRD) in which CDHR1 variants were identified, and to characterize the marked intrafamilial phenotypic variability.

This retrospective case series included three brothers diagnosed with retinal dystrophy at Juntendo University Hospital. Comprehensive ophthalmic evaluations were performed, including best-corrected visual acuity (BCVA), Goldmann perimetry, fundus photography, fundus autofluorescence (FAF), optical coherence tomography (OCT), and full-field electroretinogram (ERG). Genetic testing was conducted using next-generation sequencing with an IRD gene panel.

All three patients exhibited progressive visual decline with onset in their 40s–50s. Fundus examination revealed severe macular atrophy in two brothers (Cases 1 and 2), consistent with cone–rod dystrophy, whereas the youngest (Case 3) showed diffuse retinal degeneration with bone-spicule pigmentation resembling retinitis pigmentosa. FAF demonstrated hypoautofluorescence in the macula and hyperautofluorescence at the borders of atrophic areas in Cases 1 and 2, but widespread hypoautofluorescence in Case 3. ERG revealed rod–cone dysfunction in Cases 1 and 2 and non-recordable responses in Case 3. Genetic analysis identified a single heterozygous CDHR1 c.748C>A (p.Pro250Thr) variant in Case 1. In Cases 2 and 3, two heterozygous CDHR1 variants—c.748C>A (p.Pro250Thr) and c.2027T>A (p.Ile676Asn)—were detected. Case 1 as having a single heterozygous CDHR1 variant with a phenotype overlapping that of Cases 2 and 3, and explicitly note that the genetic diagnosis in Case 1 remains inconclusive.

This study describes a Japanese family with IRD showing substantial intrafamilial phenotypic heterogeneity, ranging from macular-predominant cone–rod dystrophy to generalized rod–cone dystrophy, in the context of identified CDHR1 variants. These findings highlight the complexity of genotype–phenotype correlations in CDHR1-related retinal disease and underscore the importance of cautious interpretation of genetic results, particularly when variants of uncertain significance are identified.

## Linked entities

- **Genes:** CDHR1 (cadherin related family member 1) [NCBI Gene 92211]
- **Diseases:** inherited retinal dystrophy (MONDO:0019118), cone–rod dystrophy (MONDO:0011458), retinitis pigmentosa (MONDO:0008377)

## Full-text entities

- **Genes:** Cdhr1 (cadherin-related family member 1) [NCBI Gene 170677] {aka Pcdh21, Prcad, mKIAA1775}, CDHR1 (cadherin related family member 1) [NCBI Gene 92211] {aka CORD15, PCDH21, PRCAD, RP65}, RP1 (RP1 axonemal microtubule associated) [NCBI Gene 6101] {aka DCDC4A, ORP1}, PROM1 (prominin 1) [NCBI Gene 8842] {aka AC133, CD133, CORD12, MCDR2, MSTP061, PROML1}
- **Diseases:** FAF (MESH:C535828), combined (MESH:D053632), blindness (MESH:D001766), autosomal recessive disease (MESH:D030342), hemorrhoids (MESH:D006484), retinal disease (MESH:D012164), glaucoma (MESH:D005901), RP (MESH:D012174), cataract (MESH:D002386), outer retinal degeneration (MESH:D012162), atrophy (MESH:D001284), atrophic (MESH:D020966), bone-spicule pigmentation (MESH:D001847), LOMD (MESH:D008268), loss of function (MESH:D006315), outer retinal atrophy (MESH:D012173), Autosomal recessive inherited retinal dystrophies (MESH:D058499), CRD (MESH:D000071700), photophobia (MESH:D020795), night blindness (MESH:D009755), hypertension (MESH:D006973), lumbar disc herniation (MESH:C535531), visual decline (MESH:D014786), predominant disease (MESH:D004194), central scotoma (MESH:D012607)
- **Chemicals:** PP3 (-)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** p.Pro250Thr, rs186486854, Pro250Thr, A-C, rs199674847, rs752150870, c.748C>A, c.748C>A

## Full text

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## Figures

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## References

16 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920184/full.md

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Source: https://tomesphere.com/paper/PMC12920184