# DNA Hypermethylation of the ZNF382 Promoter Region and Low mRNA Expression of ZNF382 Promote Diffuse Large B‐Cell Lymphoma Occurrence and Progression

**Authors:** Wanhua An, Shuli Guo, Sizhe Liu, Pengli Xiao, Emma Mi, Huirui Wang

PMC · DOI: 10.1002/cnr2.70502 · Cancer Reports · 2026-02-19

## TL;DR

This study shows that DNA hypermethylation of the ZNF382 gene and its low expression are linked to the development and progression of diffuse large B-cell lymphoma, suggesting ZNF382 as a potential treatment target.

## Contribution

The study identifies ZNF382 promoter hypermethylation and low expression as novel factors in DLBCL progression and demonstrates its potential as a therapeutic target.

## Key findings

- ZNF382 promoter hypermethylation and low mRNA expression are significantly associated with DLBCL.
- Demethylating agents increase ZNF382 expression and induce apoptosis in DLBCL cells.
- Overexpression of ZNF382 inhibits cancer cell proliferation, migration, and clonogenicity.

## Abstract

The pathogenesis of diffuse large B‐cell lymphoma (DLBCL) remains unclear. Zinc finger protein 382 (ZNF382) expression is significantly downregulated in DLBCL, which is associated with poor prognosis. However, the underlying mechanisms remain unknown.

To investigate the association between DNA methylation of the promoter region of ZNF382 and ZNF382 expression with the occurrence and progression of DLBCL and to analyze the clinical significance of ZNF382 in DLBCL.

DLBCL cell lines and reactive hyperplastic lymph node tissues were used as the experimental subjects. Methylation‐specific polymerase chain reaction and reverse‐transcription polymerase chain reaction analyses revealed significantly higher methylation of the promoter region of ZNF382 (p < 0.0001), whereas ZNF382 mRNA expression was significantly lower (p < 0.01) in DLBCL cells compared with those in reactive hyperplastic lymph node tissues. Cells were treated with the demethylating agent decitabine (DAC), and the methylation status of the promoter and expression levels of ZNF382 were determined. ZNF382 promoter methylation was significantly reduced (p < 0.01) in DLBCL cells, whereas ZNF382 mRNA expression was significantly increased (p < 0.01) compared with those in the control cells. Furthermore, compared with that in the blank control group, the apoptosis rate of DLBCL cells was significantly increased following DAC intervention (p < 0.01). A cell model of ZNF382 overexpression was constructed, and its proliferation, migration, and clonogenic capacities were detected using CCK‐8, Transwell, and soft agar assays, respectively. Compared with those of the vector control group, the cell proliferation, migration, and clone formation abilities of the ZNF382 overexpression group were significantly inhibited (p < 0.01).

DNA hypermethylation in the promoter region of ZNF382 and low ZNF382 mRNA expression are closely related to the occurrence and progression of DLBCL. Moreover, ZNF382 overexpression significantly increased apoptosis and inhibited cell proliferation, migration, and clone formation. Therefore, ZNF382 has potential as a therapeutic target in the treatment of DLBCL.

## Linked entities

- **Genes:** ZNF382 (zinc finger protein 382) [NCBI Gene 84911]
- **Chemicals:** decitabine (PubChem CID 451668)
- **Diseases:** diffuse large B-cell lymphoma (MONDO:0018905)

## Full-text entities

- **Genes:** Zfp382 (zinc finger protein 382) [NCBI Gene 233060] {aka 4930428B01Rik, 5930415A09Rik, KS1, Znf382}, BTRC (beta-transducin repeat containing E3 ubiquitin protein ligase) [NCBI Gene 8945] {aka BETA-TRCP, FBW1A, FBXW1, FBXW1A, FWD1, bTrCP}, ZNF382 (zinc finger protein 382) [NCBI Gene 84911] {aka KS1}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}
- **Diseases:** multiple myeloma and lymphoma (MESH:D009101), reactive hyperplasia (MESH:D019310), tumor (MESH:D009369), tumorigenic (MESH:D002471), DLBCL (MESH:D016403), liver cancer (MESH:D006528), myelodysplastic syndromes (MESH:D009190), gastrointestinal malignancies (MESH:D005770), Hodgkin lymphoma (MESH:D006689), NHL (MESH:D008228), lymphoma (MESH:D008223)
- **Chemicals:** agar (MESH:D000362), streptomycin (MESH:D013307), dexamethasone (MESH:D003907), FITC (MESH:D016650), PI (MESH:D010716), Puromycin (MESH:D011691), penicillin (MESH:D010406), DAC (-), crystal violet (MESH:D005840), decitabine (MESH:D000077209), AZA (MESH:D001374), polybrene (MESH:D006583), carrelizumab (MESH:C000631724), Trizol (MESH:C411644), agarose (MESH:D012685), bortezomib (MESH:D000069286), CO2 (MESH:D002245)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Xenopus laevis (African clawed frog, species) [taxon 8355]
- **Cell lines:** 293 T — Homo sapiens (Human), Transformed cell line (CVCL_0063), U2932 — Homo sapiens (Human), Diffuse large B-cell lymphoma activated B-cell type, Cancer cell line (CVCL_1896), OCI-LY10 — Homo sapiens (Human), Diffuse large B-cell lymphoma activated B-cell type, Cancer cell line (CVCL_8795), -8 — Xenopus laevis (African clawed frog), Spontaneously immortalized cell line (CVCL_4564)

## Full text

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## Figures

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## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12920067/full.md

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Source: https://tomesphere.com/paper/PMC12920067