# Human Endometriotic Lesion‐Derived Small Extracellular Vesicles Impair Macrophage Function in the Peritoneal Microenvironment

**Authors:** Yifan Wang, Zhixing Jin, Abigail Freeman Blatchford, Banayot Hosh, Malak Amer, Ayazhan Akhatova, Krina Zondervan, Erin Greaves, Rebecca Dragovic, Christian M Becker, Jen Southcombe

PMC · DOI: 10.1002/jev2.70227 · Journal of Extracellular Vesicles · 2026-02-19

## TL;DR

This study shows that small extracellular vesicles from endometriosis lesions impair macrophage function in the peritoneal cavity, potentially contributing to disease progression.

## Contribution

The first thorough characterization of endometrial epithelial-derived sEVs in endometriosis and their immunomodulatory role via CD47/SIRP-α signaling.

## Key findings

- Endometriosis-derived sEVs suppress macrophage phagocytosis via CD47/SIRP-α signaling.
- Peritoneal fluid sEVs show high CD133/1 and EpCAM expression, indicating endometrial epithelial origin.
- CD47 blockade reverses the macrophage suppression caused by endometriosis sEVs.

## Abstract

Endometriosis (EM) is a chronic inflammatory disease that affects ∼10% of women during reproductive age. It is characterised by ectopic (ECT) growth of endometrial‐like tissue mainly in the pelvic cavity. Small extracellular vesicles (sEVs) mediate cellular interactions, but their function remains poorly understood in the pathogenesis of EM. 3D endometrial epithelial organoids (EEOs) from ECT lesions and eutopic (EUT) endometrium from EM patients and controls were established to investigate sEVs. Multiplex bead‐based flow cytometry revealed CD133/1 and EpCAM as dominant markers on EEO‐sEVs, with ECT EEO‐sEVs showing upregulation of CD44, CD29 and downregulation of EpCAM compared to EUT EEO‐sEVs. Peritoneal fluid (PF)‐sEVs displayed high and correlated CD133/1 and EpCAM expression, indicating a major contribution from endometrial epithelial (EE) cells, alongside sEVs of lymphocyte and endothelial origin. Functionally, both ECT EEO‐sEVs and PF‐sEVs from EM patients significantly suppressed macrophage phagocytosis, as assessed by pH‐sensitive fluorescent bioparticles. The effect was reversed by CD47 blockade. The coexpression of CD47 with CD133/1 and EpCAM on PF‐sEVs indicates the involvement of EE cell‐derived sEVs in CD47/SIRP‐α mediated suppression. This study provides the first thorough characterisation of EE‐derived sEVs utilising EEO models in EM and demonstrates their potential immunomodulatory role in the peritoneal microenvironment via CD47/SIRP‐α signalling.

sEVs in the peritoneal microenvironment originate from immune cells and endometrium. In endometriosis (EM), lesion‐derived sEVs show upregulation of CD44 and CD29 and downregulation of EpCAM compared to those from eutopic endometrium. This contributes to EM specific sEV signature in the peritoneal cavity and likely suppresses macrophage phagocytosis via the CD47/SIRP‐α pathway.

## Linked entities

- **Proteins:** CD47 (CD47 molecule), SIRPA (signal regulatory protein alpha), EPCAM (epithelial cell adhesion molecule), CD44 (CD44 molecule (IN blood group)), ITGB1 (integrin subunit beta 1)
- **Diseases:** endometriosis (MONDO:0005133)

## Full-text entities

- **Genes:** CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}, CD47 (CD47 molecule) [NCBI Gene 961] {aka IAP, MER6, OA3}, MCAM (melanoma cell adhesion molecule) [NCBI Gene 4162] {aka CD146, HEMCAM, METCAM, MUC18, MelCAM}, CD19 (CD19 molecule) [NCBI Gene 930] {aka B4, CVID3}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, IL13 (interleukin 13) [NCBI Gene 3596] {aka IL-13, P600}, Epcam (epithelial cell adhesion molecule) [NCBI Gene 17075] {aka CD326, EGP, EGP-2, Egp314, Ep-CAM, EpCAM1}, IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, ITGA2B (integrin subunit alpha 2b) [NCBI Gene 3674] {aka BDPLT16, BDPLT2, CD41, CD41B, FMAIT2, GP2B}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, MIR30C1 (microRNA 30c-1) [NCBI Gene 407031] {aka MIRN30C1, mir-30c-1}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, SIRPA (signal regulatory protein alpha) [NCBI Gene 140885] {aka BIT, CD172A, MFR, MYD-1, MYD1, P84}, EPCAM (epithelial cell adhesion molecule) [NCBI Gene 4072] {aka Ber-Ep4, BerEp4, DIAR5, EGP-2, EGP314, EGP40}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, CD24 (CD24 molecule) [NCBI Gene 100133941] {aka CD24A}, Cd47 (CD47 antigen (Rh-related antigen, integrin-associated signal transducer)) [NCBI Gene 16423] {aka 9130415E20Rik, B430305P08Rik, IAP, Itgp}, SDCBP (syndecan binding protein) [NCBI Gene 6386] {aka MDA-9, MDA9, SDCBP1, ST1, SYCL, TACIP18}, MIR223 (microRNA 223) [NCBI Gene 407008] {aka MIRN223, miRNA223, mir-223}, CD86 (CD86 molecule) [NCBI Gene 942] {aka B7-2, B7.2, B70, BU63, CD28LG2, CD86 v6}, MME (membrane metalloendopeptidase) [NCBI Gene 4311] {aka CALLA, CD10, CMT2T, NEP, SCA43, SFE}, ITGB1 (integrin subunit beta 1) [NCBI Gene 3688] {aka CD29, FNRB, GPIIA, MDF2, MSK12, VLA-BETA}, SELP (selectin P) [NCBI Gene 6403] {aka CD62, CD62P, GMP140, GRMP, LECAM3, PADGEM}, Itgb1 (integrin beta 1 (fibronectin receptor beta)) [NCBI Gene 16412] {aka 4633401G24Rik, CD29, Fnrb, Gm9863, gpIIa}, CD14 (CD14 molecule) [NCBI Gene 929], ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}, CD40 (CD40 molecule) [NCBI Gene 958] {aka Bp50, CDW40, TNFRSF5, p50}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, MRC1 (mannose receptor C-type 1) [NCBI Gene 4360] {aka CD206, CLEC13D, CLEC13DL, MMR, MRC1L1, bA541I19.1}, AFAP1-AS1 (AFAP1 antisense RNA 1) [NCBI Gene 84740] {aka AFAP1-AS, AFAP1AS, ATMLP}, ARG1 (arginase 1) [NCBI Gene 383], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CD1C (CD1c molecule) [NCBI Gene 911] {aka BDCA1, CD1, R7}, ROR1 (ROR family WNT receptor 1) [NCBI Gene 4919] {aka NTRKR1, dJ537F10.1}, PAEP (progestagen associated endometrial protein) [NCBI Gene 5047] {aka GD, GdA, GdF, GdS, PAEG, PEP}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, IL2RA (interleukin 2 receptor subunit alpha) [NCBI Gene 3559] {aka CD25, IDDM10, IL2R, IMD41, TCGFR, p55}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}, GP9 (glycoprotein IX platelet) [NCBI Gene 2815] {aka CD42a, GPIX}, ADA2 (adenosine deaminase 2) [NCBI Gene 51816] {aka ADGF, CECR1, IDGFL, PAN, SNEDS, VAIHS}, CD63 (CD63 molecule) [NCBI Gene 967] {aka AD1, HOP-26, ME491, MLA1, OMA81H, Pltgp40}, Cd44 (CD44 antigen) [NCBI Gene 12505] {aka HERMES, Ly-24, Pgp-1}, CD9 (CD9 molecule) [NCBI Gene 928] {aka BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29}, LGMNP1 (legumain pseudogene 1) [NCBI Gene 122199] {aka LGMN2P}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, CD209 (CD209 molecule) [NCBI Gene 30835] {aka CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1, hDC-SIGN}, CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, CD81 (CD81 molecule) [NCBI Gene 975] {aka CVID6, S5.7, TAPA1, TSPAN28}, PECAM1 (platelet and endothelial cell adhesion molecule 1) [NCBI Gene 5175] {aka CD31, CD31/EndoCAM, GPIIA', PECA1, PECAM-1, endoCAM}, SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, Cd24a (CD24a antigen) [NCBI Gene 12484] {aka Cd24, HSA, Ly-52, nectadrin}, AGO1 (argonaute RISC component 1) [NCBI Gene 26523] {aka EIF2C, EIF2C1, GERP95, NEDLBAS, Q99, hAgo1}, APC (APC regulator of Wnt signaling pathway) [NCBI Gene 324] {aka BTPS2, DESMD, DP2, DP2.5, DP3, GS}, NCAM1 (neural cell adhesion molecule 1) [NCBI Gene 4684] {aka CD56, MSK39, NCAM}
- **Diseases:** ovarian cancer (MESH:D010051), ES (MESH:D036821), breast cancer (MESH:D001943), endometrial lesion (MESH:D014591), chronic pelvic pain (MESH:D011472), ECT (MESH:C566852), ovarian endometrioma (MESH:D010049), associated pain (MESH:D000072716), dysmenorrhea (MESH:D004412), HT (MESH:D006973), EE (MESH:D009375), tumour metastasis (MESH:D009362), PF (MESH:D010538), infertility (MESH:D007246), dyspareunia (MESH:D004414), fatigue (MESH:D005221), endometriotic lesions (MESH:D009059), gastric cancer (MESH:D013274), reproductive disorders (MESH:D060737), Parkinson disease (MESH:D010300), peritoneal lesions (MESH:D010532), EM III (MESH:D004715), pain (MESH:D010146), neurodegenerative diseases (MESH:D019636), injury (MESH:D014947), inflammatory disease (MESH:D007249), atrophy (MESH:D001284), cancer (MESH:D009369)
- **Chemicals:** CO2 (MESH:D002245), formaldehyde (MESH:D005557), DAPI (MESH:C007293), PVDF (MESH:C024865), PBS (MESH:D007854), Tween-20 (MESH:D011136), penicillin (MESH:D010406), S (MESH:D013455), cytochalasin D (MESH:D015638), Y27632 (MESH:C108830), Blotto (-), Alexa Fluor 488 (MESH:C000711379), PKH-26 (MESH:C070080), uranyl acetate (MESH:C005460), 2-mercaptoethanol (MESH:D008623), Ponceau S (MESH:C032756), hyaluronan (MESH:D006820), copper (MESH:D003300), progesterone (MESH:D011374), P/ (MESH:D010758), methanol (MESH:D000432), carbon (MESH:D002244), Bis-Tris (MESH:C026272), streptomycin (MESH:D013307), Triton X-100 (MESH:D017830), PMA (MESH:D013755)
- **Species:** Homo sapiens (human, species) [taxon 9606], Sus scrofa (pig, species) [taxon 9823], Escherichia coli (E. coli, species) [taxon 562], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** M0 — Homo sapiens (Human), Familial hypertrophic cardiomyopathy type 26, Induced pluripotent stem cell (CVCL_A6XE), THP-1 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0006), ES — Homo sapiens (Human), Endometrioid stromal sarcoma, Cancer cell line (CVCL_1205), EE — Ovis aries (Sheep), Telomerase immortalized cell line (CVCL_C0WP), PC2 — Homo sapiens (Human), Pancreatic carcinoma, Cancer cell line (CVCL_C1YF)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12919373/full.md

## References

90 references — full list in the complete paper: https://tomesphere.com/paper/PMC12919373/full.md

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Source: https://tomesphere.com/paper/PMC12919373