# Biallelic DAW1 variants reveal tissue-specific role in heterotaxy without primary ciliary dyskinesia

**Authors:** Saurabh Kulkarni, Dana Urbatsch, Anburaj Jeyaraj, Shruti Bedekar, Venkatramanan Rao, Shelby White, Matthew Thomas, Andrea Garrod, Christina Peroutka, Aakrosh Ratan

PMC · DOI: 10.21203/rs.3.rs-8745655/v1 · Research Square · 2026-02-12

## TL;DR

This study shows how DAW1 gene variants cause specific developmental issues in some tissues but not others, helping explain why some patients have heterotaxy and heart defects without ciliary problems.

## Contribution

The study provides functional evidence for tissue-specific roles of DAW1 variants in heterotaxy and supports reclassification of variants under ACMG guidelines.

## Key findings

- DAW1 variants cause left–right patterning and cardiac defects but not primary ciliary dyskinesia.
- The p.Arg114Gln variant rescues mucociliary flow but not left–right patterning.
- The splice-site variant leads to complete loss of DAW1 function in all tested contexts.

## Abstract

Defects in motile cilia cause a range of disorders, including heterotaxy (HTX), congenital heart disease (CHD), and primary ciliary dyskinesia (PCD). Although these conditions often co-occur, the genetic and mechanistic bases for tissue-specific manifestations remain poorly understood. Here, we identify compound heterozygous variants in DAW1, a dynein arm assembly factor, in a proband with HTX and complex congenital heart disease but no clinical signs of PCD. Whole-genome sequencing revealed a maternally inherited canonical splice-site variant (c.648 + 1G > A) and a paternally inherited missense variant (c.341G > A; p.Arg114Gln), both classified as variants of uncertain significance under ACMG/AMP guidelines. Using Xenopus tropicalis, we show that Daw1 depletion disrupts left–right patterning, cardiac looping, and mucociliary flow, all of which are rescued by wild-type human DAW1. Functional testing of patient alleles showed notable tissue specificity: p.Arg114Gln fully rescued mucociliary flow but did not restore left–right patterning, while the splice-site variant resulted in a complete loss of function in both contexts. These findings closely match the proband’s clinical phenotype and provide strong functional evidence to support reclassifying c.648 + 1G > A as pathogenic and p.Arg114Gln as a context-dependent hypomorphic allele. This study establishes functional criteria for interpreting DAW1 variants, shows how developmental context clarifies genotype–phenotype relationships, and highlights how in vivo models can support ACMG reclassification of unresolved HTX-related variants.

## Linked entities

- **Genes:** DAW1 (dynein assembly factor with WD repeats 1) [NCBI Gene 164781]
- **Diseases:** congenital heart disease (MONDO:0005453), primary ciliary dyskinesia (MONDO:0016575)
- **Species:** Xenopus tropicalis (taxon 8364)

## Full-text entities

- **Genes:** INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, CCDC39 (coiled-coil domain 39 molecular ruler complex subunit) [NCBI Gene 339829] {aka CFAP59, CILD14, FAP59}, DNAI1 (dynein axonemal intermediate chain 1) [NCBI Gene 27019] {aka CILD1, DIC1, ICS1, PCD, oda6}, TRIM27 (tripartite motif containing 27) [NCBI Gene 5987] {aka RFP, RNF76}, SP6 (Sp6 transcription factor) [NCBI Gene 80320] {aka AI1K, EPFN, EPIPROFIN, KLF14}, FOXJ1 (forkhead box J1) [NCBI Gene 2302] {aka CILD43, FKHL13, HFH-4, HFH4}, pitx2 (paired like homeodomain 2) [NCBI Gene 549981] {aka arp1, brx1, idg2, igds, igds2, ihg2}, cga (glycoprotein hormones, alpha polypeptide) [NCBI Gene 100488153] {aka cg-alpha, cga-a, cga-b, fsha, gpha, gpha1}, RYR1 (ryanodine receptor 1) [NCBI Gene 6261] {aka CCO, CMYO1A, CMYO1B, CMYP1A, CMYP1B, KDS}, DNAH5 (dynein axonemal heavy chain 5) [NCBI Gene 1767] {aka CILD3, DNAHC5, HL1, KTGNR, PCD}, KAT8 (lysine acetyltransferase 8) [NCBI Gene 84148] {aka LIGOWS, MOF, MYST1, ZC2HC8, hMOF}, DNAI2 (dynein axonemal intermediate chain 2) [NCBI Gene 64446] {aka CILD9, DIC2, oda6}, CCDC40 (coiled-coil domain 40 molecular ruler complex subunit) [NCBI Gene 55036] {aka CFAP172, CILD15, FAP172}, PITX2 (paired like homeodomain 2) [NCBI Gene 5308] {aka ARP1, ASGD4, Brx1, IDG2, IGDS, IGDS2}, IFT46 (intraflagellar transport 46) [NCBI Gene 56912] {aka C11orf2, C11orf60, CFAP32, FAP32}, daw1 (dynein assembly factor with WDR repeat domains 1) [NCBI Gene 394975] {aka oda16, wdr16, wdr69}, ZIC3 (Zic family zinc finger 3) [NCBI Gene 7547] {aka HTX, HTX1, VACTERLX, ZNF203}, CCDC22 (CCC complex scaffolding subunit CCDC22) [NCBI Gene 28952] {aka CXorf37, JM1, RTSC2}, DAW1 (dynein assembly factor with WD repeats 1) [NCBI Gene 164781] {aka CILD52, DNAAF18, ODA16, WDR69}, DNAH11 (dynein axonemal heavy chain 11) [NCBI Gene 8701] {aka CILD7, DNAHBL, DNAHC11, DNHBL, DPL11}
- **Diseases:** situs solitus (MESH:D002278), ASD (MESH:D001321), asthma (MESH:D001249), atrioventricular septal defects (MESH:C562831), congenital anomalies (MESH:D000013), situs inversus (MESH:D012857), respiratory complications (MESH:D012140), left ventricular outflow tract obstruction (MESH:D000092242), hearing loss (MESH:D034381), single (MESH:D012640), respiratory distress (MESH:D012128), male infertility (MESH:D007248), Subarterial ventricular septal defect (MESH:D006345), ciliopathies (MESH:D000072661), respiratory dysfunction (MESH:D012131), Ritscher-Schinzel syndrome type 2 (MESH:C535313), hemorrhage (MESH:D006470), otosinopulmonary infections (MESH:D007239), PDA (MESH:D004374), chronic cough (MESH:D003371), CHD (MESH:D006330), laterality defects (MESH:C563391), obstructive lung disease (MESH:D008173), Defects in motile cilia (MESH:D015835), chronic respiratory symptoms (MESH:D012818), King-Denborough syndrome (MESH:C536883), anomalous pulmonary venous return (MESH:D012587), intellectual disability (MESH:D008607), bronchiectasis (MESH:D001987), Dextrotransposition of the great arteries (MESH:D014188), malformations (MESH:C564254), ventriculomegaly (MESH:D006849), chronic (MESH:D002908), HTX (MESH:D059446), PCD (MESH:D002925), type 2 diabetes (MESH:D003924), DORV (OMIM:217095), wheezing (MESH:D012135), intestinal malrotation (MESH:C562456), splenic abnormalities (MESH:D013158), Double outlet right ventricle (MESH:D004310), Cardiac Looping (MESH:D006331), Li-Ghorgani-Weisz-Hubshman syndrome (MESH:D016864)
- **Chemicals:** MO (MESH:D060172), Triton X-100 (MESH:D017830), oxygen (MESH:D010100), Benzocaine (MESH:D001566), Phalloidin (MESH:D010590), Gentamicin (MESH:D005839), EtOH (MESH:D000431), latex (MESH:D007840), Alexa fluor 488 (MESH:C000711379), oil (MESH:D009821), 1xMBS (-), Dextran (MESH:D003911), digoxigenin (MESH:D004076), PBS (MESH:D007854), Oregon green 488 (MESH:C436864), PFA (MESH:C003043)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Chlamydomonas (genus) [taxon 3052], Pan troglodytes (chimpanzee, species) [taxon 9598], Xenopus tropicalis (tropical clawed frog, species) [taxon 8364], Homo sapiens (human, species) [taxon 9606], Danio rerio (leopard danio, species) [taxon 7955], Xenopus laevis (African clawed frog, species) [taxon 8355]
- **Mutations:** Cysteine in 1, p.(Asn143Asp), p.Val181_Arg216del, rs927376980, p. (Ser364Thr), p.(Trp119*), p.(Leu66*), R114Q, Trp372Cys

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## References

66 references — full list in the complete paper: https://tomesphere.com/paper/PMC12919210/full.md

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Source: https://tomesphere.com/paper/PMC12919210