# Nuclear coat protein drives a multifaceted tolerance program during Turnip crinkle virus infection

**Authors:** Dana J. Rademacher, Braeden Kingsolver, Akashata Dawane, Jared P. May

PMC · DOI: 10.21203/rs.3.rs-8695072/v1 · Research Square · 2026-02-12

## TL;DR

This paper shows how a plant virus uses a protein in the cell nucleus to control infection and prevent host damage.

## Contribution

The study reveals a new role for viral coat protein in activating host tolerance mechanisms during infection.

## Key findings

- Nuclear localization of TCV coat protein is essential for host reprogramming and virus accumulation.
- Loss of ROS or autophagy leads to severe tissue damage and similar transcriptional responses.
- Nuclear CP both accelerates symptoms and prevents cell death through ROS and autophagy.

## Abstract

Plant viruses must replicate yet maintain host tissue viability to sustain infection and transmission. We show that Turnip crinkle virus (TCV) uses nuclear localization of its coat protein (CP) to coordinate this balance. A nuclear-export mutant (TCVNES) retained core CP functions but causd attenuated symptoms and accumulated ~10-fold less than wild-type TCV. Transcriptomics and functional assays demonstrated that nuclear CP is required for large-scale host reprogramming, including SA accumulation and RBOH-dependent reactive oxygen species (ROS) production that promote TCV accumulation, as well as autophagy induction. Genetic loss of NADPH oxidase-derived ROS (rbohD rbohF) or autophagy (atg5-1) triggered rapid tissue collapse, necrosis, and convergent collapse-associated transcriptional responses following TCV infection. Nuclear CP consistently accelerated symptom onset in all backgrounds and exacerbated cell death and necrosis in rbohD rbohF and atg5-1. Nuclear CP is therefore responsible for early symptom development yet also required to activate ROS- and autophagy-dependent tolerance pathways.

## Linked entities

- **Genes:** LOC11434624 (respiratory burst oxidase homolog protein B) [NCBI Gene 11434624], RBOHD (respiratory burst oxidase homologue D) [NCBI Gene 834842], RBOH F (respiratory burst oxidase protein F) [NCBI Gene 842710], ATG5_1 (autophagy protein 5) [NCBI Gene 19248214]
- **Proteins:** coat protein (coat protein)
- **Species:** Turnip crinkle virus (taxon 11988)

## Full-text entities

- **Genes:** DCP1B (decapping mRNA 1B) [NCBI Gene 196513] {aka DCP1}, RPP14 (ribonuclease P/MRP subunit p14) [NCBI Gene 11102] {aka P14}, RBOH F (respiratory burst oxidase protein F) [NCBI Gene 842710] {aka ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE HOMOLOG  F, ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE HOMOLOG F, ATRBOH F, ATRBOHF, CYTOCHROME B245 BETA CHAIN HOMOLOG RBOHAP108, F22C12.18}, SAC8 (SAC domain-containing protein 8) [NCBI Gene 824346] {aka ATG5, SAC domain-containing protein 8, TRANSMEMBRANE PROTEIN G5P}, NBR1 (ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein) [NCBI Gene 828571] {aka Arabidopsis thaliana next to BRCA1 gene 1, AtNBR1, F22K18.110, F22K18_110, next to BRCA1 gene 1}, RBOHD (respiratory burst oxidase homologue D) [NCBI Gene 834842] {aka ATRBOHD, MCA23.25, MCA23_25, RESPIRATORY BURST OXIDASE, respiratory burst oxidase homologue D}, GOLPH3 (golgi phosphoprotein 3) [NCBI Gene 64083] {aka GOPP1, GPP34, MIDAS, Vps74}, AT5G40153 (peroxidase) [NCBI Gene 28721236], SAP (Transducin/WD40 repeat-like superfamily protein) [NCBI Gene 833556] {aka MXH1.20, MXH1_20, STERILE APETALA}, CP (ceruloplasmin) [NCBI Gene 1356] {aka AB073614, CP-2}, EDS16 (ADC synthase superfamily protein) [NCBI Gene 843810] {aka ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, ATICS1, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, F25A4.31, ICS1, ISOCHORISMATE SYNTHASE}, APG8A (Ubiquitin-like superfamily protein) [NCBI Gene 828287] {aka ATG8A, AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A, F1N20.80, F1N20_80}
- **Diseases:** death (MESH:D003643), Turnip crinkle virus infection (MESH:D014777), infected (MESH:D007239), tissue damage (MESH:D017695), chlorosis (MESH:D000747), necrosis (MESH:D009336), stunting (MESH:D006130)
- **Chemicals:** SA (MESH:D000077145), glycerol (MESH:D005990), 1X (-), H2O2 (MESH:D006861), uranyl acetate (MESH:C005460), salicylate (MESH:D012459), fatty acid (MESH:D005227), MES-K (MESH:C046742), Silicon carbide (MESH:C022088), acetosyringone (MESH:C051667), DAPI (MESH:C007293), Poly(A) (MESH:D011061), ROS (MESH:D017382), Tween 20 (MESH:D011136), 3,3'-Diaminobenzidine (MESH:D015100), SA (MESH:D020156), MgCl2 (MESH:D015636), chlorophyll (MESH:D002734), ethidium bromide (MESH:D004996), nitrogen (MESH:D009584), TBS (MESH:D013725), Ponceau S (MESH:C032756), TRIzol (MESH:C411644), H2O (MESH:D014867), ethanol (MESH:D000431), Laemmli buffer (MESH:C088816), copper (MESH:D003300), acetic acid (MESH:D019342), SDS (MESH:D012967)
- **Species:** Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Agrobacterium (genus) [taxon 357], Leptospira sp. AB (species) [taxon 103236], Nicotiana benthamiana (species) [taxon 4100], Pothos (genus) [taxon 174212], Turnip crinkle virus (no rank) [taxon 11988], Acinetobacter sp. (species) [taxon 472]
- **Mutations:** C for 5-10

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12919189/full.md

## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC12919189/full.md

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Source: https://tomesphere.com/paper/PMC12919189