# Quantitative Stimulated Emission Depletion (STED) Microscopy with DNA-Fluorophore Labels

**Authors:** Laurell F. Kessler, Yunqing Li, Ashwin Balakrishnan, Mike Heilemann

PMC · DOI: 10.1021/acsnano.5c21411 · ACS Nano · 2026-02-03

## TL;DR

This paper introduces a new method for counting molecules using STED microscopy with DNA-fluorophore labels, enabling precise imaging at the single-protein level.

## Contribution

A new DNA-fluorophore labeling method for quantitative STED microscopy with molecule counting capability.

## Key findings

- Accurate molecule counting was demonstrated on DNA origami structures.
- EGF receptor monomers and dimers were visualized and quantified in cells.
- The method is robust, fast, and easy to implement for single-protein resolution.

## Abstract

Stimulated emission depletion (STED) microscopy enables
super-resolution
imaging of complex biological samples in 3D, in large volumes, and
live. However, molecular quantification with STED has remained underexplored.
Here, we present a straightforward approach for quantitative STED
that enables molecule counting. For this purpose, we designed DNA-fluorophore
labels that enable signal amplification and allow for reliable intensity-based
quantitative imaging. We demonstrate accurate molecule counting on
DNA origami. Furthermore, we visualized and quantified EGF receptor
monomers and dimers in cells. In summary, we introduce a robust, fast,
and easy-to-implement tool for quantitative STED microscopy with single-protein
resolution.

## Full-text entities

- **Genes:** EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12918720/full.md

## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC12918720/full.md

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Source: https://tomesphere.com/paper/PMC12918720