# Identification of two immunodominant and neutralizing linear B-cell epitopes exposed on the surface of the porcine deltacoronavirus spike protein

**Authors:** Xi Li, Huan Ye, Xinna Ge, Lei Zhou, Xin Guo, Jun Han, Yongning Zhang, Hanchun Yang

PMC · DOI: 10.1186/s13567-025-01690-x · Veterinary Research · 2026-01-27

## TL;DR

Researchers identified two key regions on a virus that causes diarrhea in pigs, which could help in developing diagnostics and vaccines.

## Contribution

The study maps two conserved, surface-exposed B-cell epitopes on the PDCoV spike protein with neutralizing potential.

## Key findings

- Two monoclonal antibodies (B8F10 and G10C2) bind to linear epitopes on the PDCoV S1 protein.
- The epitopes 342LETNFMCT349 and 491VINNTVVG498 are conserved across PDCoV strains and are surface-exposed.
- A V491A mutation in one epitope prevents antibody binding, suggesting an immune escape mechanism.

## Abstract

Porcine deltacoronavirus (PDCoV) is an enteropathogenic virus that causes severe diarrhea in pigs, particularly suckling piglets, and exhibits cross-species transmission with zoonotic potential. The S1 subunit of the viral spike (S) protein mediates cell entry and elicits neutralizing antibodies, making it an ideal target for diagnostics, prophylaxis, and therapeutics. Here, we produced two monoclonal antibodies (mAbs), B8F10 and G10C2, by immunizing BALB/c mice with a recombinant PDCoV S1 protein fused to a human IgG Fc fragment, expressed in an insect baculovirus system and purified using Protein A/G magnetic beads. Both mAbs can specifically recognize native PDCoV S protein in indirect immunofluorescence assays and western blot analyses under denaturing conditions, indicating their binding to linear epitopes. Isotyping classified both as IgG1/κ, and sequence analysis revealed distinct heavy-chain complementarity-determining regions (CDRs) but identical light-chain CDRs. Using truncated S1 proteins coupled with Pepscan ELISA, the B8F10 and G10C2 epitopes were precisely mapped to 342LETNFMCT349 and 491VINNTVVG498, respectively. These epitopes can be recognized by both mAbs and swine PDCoV antiserum, confirming their immunodominance. While global PDCoV strain alignments revealed high conservation of these epitopes, a V491A mutation within the G10C2-binding site abolished mAb binding. Structural analysis confirmed both epitopes are surface-exposed on S1. These findings demonstrate the diagnostic potential of these mAbs and the epitopes’ suitability as vaccine targets. Their high conservation suggests broad applicability, whereas the V491A mutation may represent an immune escape mechanism. These epitopes could serve as diagnostic markers, immunotherapeutics, or the foundation for epitope-based vaccines to induce protective immunity.

The online version contains supplementary material available at 10.1186/s13567-025-01690-x.

## Linked entities

- **Proteins:** PSMD1 (proteasome 26S subunit, non-ATPase 1), S (Star), IGG (Immunoglobulin G level)
- **Diseases:** diarrhea (MONDO:0001673)
- **Species:** Porcine deltacoronavirus (taxon 1586324)

## Full-text entities

- **Diseases:** diarrhea (MESH:D003967)
- **Species:** Porcine deltacoronavirus (no rank) [taxon 1586324], Sus scrofa (pig, species) [taxon 9823], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** V491A

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12918246/full.md

## References

1 references — full list in the complete paper: https://tomesphere.com/paper/PMC12918246/full.md

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Source: https://tomesphere.com/paper/PMC12918246