# New Dual Pan-PI3K/mTOR Inhibitor: Design, Synthesis, Cytotoxic Action, Permeation, Metabolic Stability, and In Silico Protein–Ligand Interaction

**Authors:** Cristiane Aparecida e Silva, Raysa Magali Pillpe-Meza, Wesley Leandro Gouveia, Joana D’Arc da Silva Trindade, Gisele Barbosa, Amanda Marques Seixas Vieira, Heber Victor Tolomeu, Rayane França Pereira, Carlos Antônio do Nascimento Santos, Leonardo Freire-de-Lima, Lidia Moreira Lima

PMC · DOI: 10.1021/acsomega.5c10162 · ACS Omega · 2026-02-05

## TL;DR

Researchers designed a new dual PI3K/mTOR inhibitor with improved properties for treating cancer, showing promise in leukemia cells.

## Contribution

A novel morpholino-triazine derivative (LASSBio-2337) with dual pan-PI3K/mTOR inhibition and activity against drug-resistant leukemia cells.

## Key findings

- Compound 9a (LASSBio-2337) inhibits PI3K and mTOR with IC50 values of 0.3–5.8 μM.
- It shows cytotoxic effects in drug-resistant leukemia cells while sparing healthy cells.
- The compound has moderate permeability but low metabolic stability, indicating potential for further optimization.

## Abstract

The PI3K/AKT/mTOR
pathway is frequently dysregulated in cancer,
contributing to tumor progression, drug resistance, and poor prognosis.
Dual PI3K/mTOR inhibitors such as gedatolisib have shown clinical
promise, but they still face challenges, including low solubility,
poor metabolic stability, and limited activity against resistant tumor
phenotypes. Here, we report a proof-of-concept study exploring structural
modifications on compound 5f, a simplified gedatolisib
analog, to generate a novel small subseries of morpholino-triazine
derivatives (9a–f). The goal was
to improve molecular interactions within the affinity site of PI3K,
investigate the impact on isoform selectivity, and evaluate pharmacological
properties relevant to early optimization. Among these, compound 9a (LASSBio-2337) emerged as a dual pan-PI3K/mTOR inhibitor
(IC50: 0.3–5.8 μM), showing cytotoxic effects
in leukemia cell lines (CC50: 4.37–9.44 μM),
including those with multidrug resistance (Lucena, MDR phenotype),
while sparing nontumor hPBMCs. Although aqueous insoluble, 9a displayed moderate PAMPA-GIT permeability and low metabolic stability
in rat liver microsomes, underscoring its potential as a lead for
further optimization. This integrated study provides structural, mechanistic,
and pharmacokinetic insights to guide next-generation PI3K/mTOR inhibitor
design.

## Linked entities

- **Proteins:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), MTOR (mechanistic target of rapamycin kinase), AKT1 (AKT serine/threonine kinase 1)
- **Chemicals:** gedatolisib (PubChem CID 44516953), morpholino-triazine (PubChem CID 21501876)
- **Diseases:** leukemia (MONDO:0004355)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Pik3cg (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma) [NCBI Gene 298947] {aka Pi3k}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, ADA2 (adenosine deaminase 2) [NCBI Gene 51816] {aka ADGF, CECR1, IDGFL, PAN, SNEDS, VAIHS}, Pik3cb (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta) [NCBI Gene 85243], TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, CDKN2A (cyclin dependent kinase inhibitor 2A) [NCBI Gene 1029] {aka ARF, CAI2, CDK4I, CDKN2, CMM2, INK4}, PTEN (phosphatase and tensin homolog) [NCBI Gene 5728] {aka 10q23del, BZS, CWS1, DEC, GLM2, MHAM}, PIK3CG (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma) [NCBI Gene 5294] {aka IMD97, PI3CG, PI3K, PI3Kgamma, PIK3, p110gamma}, G6pd (glucose-6-phosphate dehydrogenase) [NCBI Gene 24377] {aka G6pdx}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56718] {aka Frap1, RAFT1}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, PIK3R5 (phosphoinositide-3-kinase regulatory subunit 5) [NCBI Gene 23533] {aka F730038I15Rik, FOAP-2, P101-PI3K, p101}, Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, ABCB1 (ATP binding cassette subfamily B member 1) [NCBI Gene 5243] {aka ABC20, CD243, CLCS, ENPAT, GP170, MDR1}, PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta) [NCBI Gene 5293] {aka APDS, IMD14, IMD14A, IMD14B, P110DELTA, PI3K}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, DMPK (DM1 protein kinase) [NCBI Gene 1760] {aka DM, DM1, DM1PK, DMK, MDPK, MT-PK}, PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290] {aka CCM4, CLAPO, CLOVE, CWS5, HMH, MCAP}
- **Diseases:** prostate adenocarcinoma (MESH:D000230), cancer (MESH:D009369), diabetes (MESH:D003920), CML (MESH:D015464), prostate cancer (MESH:D011471), MDR (MESH:D018088), hematological malignancies (MESH:D019337), colon, breast, head and neck, and nonsmall cell lung cancers (MESH:D002289), neurological diseases (MESH:D020271), tumorigenesis (MESH:D063646), acute lymphoblastic leukemia (MESH:D054198), Cytotoxic (MESH:D064420), leukemia (MESH:D007938), breast cancer (MESH:D001943)
- **Chemicals:** PI-103 (MESH:C522973), dichloromethane (MESH:D008752), PIP2 (MESH:D019269), carboxylic acid (MESH:D002264), VIN (MESH:D014750), glucose-6-phosphate (MESH:D019298), EDTA (MESH:D004492), morpholino (MESH:D060172), cyanuric chloride (MESH:C019309), C (MESH:D002244), streptomycin (MESH:D013307), aza (MESH:D001379), ADP (MESH:D000244), triethylamine (MESH:C016162), acetonitrile (MESH:C032159), methanol (MESH:D000432), 3H (MESH:D014316), silica gel (MESH:D058428), MgCl2 (MESH:D015636), formazan (MESH:D005562), oxygen (MESH:D010100), phosphate (MESH:D010710), Gedatolisib (MESH:C549060), HCl (MESH:D006851), SDS (MESH:D012967), DTT (MESH:D004229), chloride (MESH:D002712), Aniline (MESH:C023650), 13C (MESH:C000615229), PdCl2 (MESH:C008756), ZSTK474 (MESH:C510150), ethanol (MESH:D000431), H2O (MESH:D014867), palladium (MESH:D010165), tetrazolium (MESH:D013778), amide (MESH:D000577), Triazines (MESH:D014227), MTT (MESH:C070243), NADP+ (MESH:D009249), PtdIns(3,4,5)P3 (MESH:C060974), acetone (MESH:D000096), chlorine (MESH:D002713), amines (MESH:D000588), Brij35 (MESH:C515901), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide (MESH:C022616), 3-((4-(1,4-Diazepan-1-yl)-6-morpholino-1,3,5-triazin-2-yl)amino)benzoic acid (-), 2H (MESH:D003903), dioxane (MESH:C025223), NaHCO3 (MESH:D017693), Hepes (MESH:D006531), penicillin antibiotic (MESH:D010406), silica (MESH:D012822), H (MESH:D006859), PVDF (MESH:C024865), PBS (MESH:D007854), NADH (MESH:D009243), Tween-20 (MESH:D011136), DMSO (MESH:D004121), inositol (MESH:D007294), Morpholine (MESH:C037574)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** K562-Lucena — Homo sapiens (Human), Blast phase chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_D162), MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), hPBMC — Sus scrofa (Pig), Spontaneously immortalized cell line (CVCL_6G31), K562 — Homo sapiens (Human), Blast phase chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_0004), MOLT-4 — Homo sapiens (Human), Adult T acute lymphoblastic leukemia, Cancer cell line (CVCL_0013), CRF-CEM — Pagrus major (Red sea bream), Spontaneously immortalized cell line (CVCL_8854), CCRF-CEM — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_0207), PC-3 — Homo sapiens (Human), Prostate carcinoma, Cancer cell line (CVCL_0035)

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12917617/full.md

## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC12917617/full.md

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Source: https://tomesphere.com/paper/PMC12917617