# TRIM26 deficiency drives gastric cancer lymph node metastasis via TGF-β signaling activation and modulates gemcitabine response

**Authors:** Kanger Shen, Daojiang Liu, Jing Su, Sirui Shen, Haiyan Zhang, Wei Xu

PMC · DOI: 10.3389/fcell.2026.1746425 · Frontiers in Cell and Developmental Biology · 2026-02-05

## TL;DR

This study shows that low levels of TRIM26 in gastric cancer promote lymph node spread and reduce response to gemcitabine chemotherapy.

## Contribution

The study identifies TRIM26 as a novel biomarker linking lymph node metastasis and chemoresistance in gastric cancer.

## Key findings

- TRIM26 deficiency correlates with lymph node metastasis and poor survival in gastric cancer.
- Low TRIM26 levels are associated with reduced gemcitabine sensitivity and higher IC50 values.
- TRIM26 overexpression reduces tumor growth and invasiveness in the presence of gemcitabine.

## Abstract

Globally, gastric cancer (GC) is a predominant cause of cancer-related death. Lymph node metastasis (LNM) and chemoresistance constitute two major barriers to improving outcomes, as LNM signifies advanced disease and chemoresistance consequently leads to treatment failure. This study systematically investigates the key molecular drivers underlying LNM and chemoresistance in GC to assess their therapeutic relevance.

Our study integrated single-cell and bulk transcriptomic data from GEO and TCGA. The analytical workflow comprised: Firstly, hdWGCNA for co-expression network construction; Secondly, a combination of machine learning algorithms (LASSO, random forest, and SVM-RFE) for core gene screening; Thirdly, pseudotime trajectory analysis (Monocle2/3) to delineate cell state transitions. Cell-cell communication and metabolic pathways were profiled using CellChat and scMetabolism, respectively. Computational pharmacology involved drug sensitivity prediction with the pRRophetic algorithm, complemented by molecular docking and dynamics simulations for structural insights. Finally, TRIM26’s functional roles were experimentally validated through CCK-8, Transwell, and colony formation assays, alongside protein-level verification by immunohistochemistry.

Downregulation of TRIM26 in GC correlated strongly with LNM and poor survival. At single-cell resolution, TRIM26 loss in epithelial cells fueled pro-metastatic crosstalk with endothelial cells and macrophages through SELE-CD44 and SPP1-CD44/integrin axes. This triggered TGF-β activation, TP53 network dysregulation, and metabolic reprogramming of taurine and pantothenate/CoA pathways. TRIM26-low tumors were predicted to be less sensitive to gemcitabine, consistent with higher estimated IC50 values, a premise bolstered by computational evidence of stable, direct drug binding (free energies: −6.7 and −5.5 kcal/mol) and sustained interactions in 100 ns simulations. Critically, TRIM26 overexpression curtailed tumor growth and invasiveness in the presence of gemcitabine.

TRIM26 inhibits LNM by modulating TGF-β signaling and remodeling the tumor microenvironment. Clinically, low TRIM26 expression identifies tumors with reduced sensitivity to gemcitabine, reflected by higher estimated IC50 values—a correlation underpinned by computational models demonstrating stable drug binding. Thus, TRIM26 serves as a integrated prognostic and predictive biomarker, positioning it as a promising theranostic target to inform precision therapy strategies in GC.

## Linked entities

- **Genes:** TRIM26 (tripartite motif containing 26) [NCBI Gene 7726], SELE (selectin E) [NCBI Gene 6401], CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960], SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696], TP53 (tumor protein p53) [NCBI Gene 7157]
- **Chemicals:** gemcitabine (PubChem CID 60750)
- **Diseases:** gastric cancer (MONDO:0001056)

## Full-text entities

- **Genes:** TRIM24 (tripartite motif containing 24) [NCBI Gene 8805] {aka PTC6, RNF82, TF1A, TIF1, TIF1A, TIF1ALPHA}, TRIM28 (tripartite motif containing 28) [NCBI Gene 10155] {aka KAP1, PPP1R157, RNF96, TF1B, TIF1B, TIF1beta}, ANXA1 (annexin A1) [NCBI Gene 301] {aka ANX1, LPC1}, MUL1 (mitochondrial E3 ubiquitin protein ligase 1) [NCBI Gene 79594] {aka C1orf166, GIDE, MAPL, MULAN, RNF218}, Cd8a (CD8 subunit alpha) [NCBI Gene 12525] {aka Ly-2, Ly-35, Ly-B, Lyt-2}, IRAK2 (interleukin 1 receptor associated kinase 2) [NCBI Gene 3656] {aka IRAK-2}, STAT1 (signal transducer and activator of transcription 1) [NCBI Gene 6772] {aka CANDF7, IMD31A, IMD31B, IMD31C, ISGF-3, STAT91}, TRIM26 (tripartite motif containing 26) [NCBI Gene 7726] {aka RNF95, ZNF173}, Col1a2 (collagen, type I, alpha 2) [NCBI Gene 12843] {aka Col1a-2, Cola-2, Cola2, oim}, TENM1 (teneurin transmembrane protein 1) [NCBI Gene 10178] {aka ODZ1, ODZ3, TEN-M1, TEN1, TNM, TNM1}, Xbp1 (X-box binding protein 1) [NCBI Gene 22433] {aka D11Ertd39e, TREB-5, TREB5, XBP-1}, TRIM62 (tripartite motif containing 62) [NCBI Gene 55223] {aka DEAR1}, C1qc (complement component 1, q subcomponent, C chain) [NCBI Gene 12262] {aka Adib, C1qg, Ciqc}, Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}, STING1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 340061] {aka ERIS, MITA, MPYS, NET23, SAVI, STING}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, ZEB1 (zinc finger E-box binding homeobox 1) [NCBI Gene 6935] {aka AREB6, BZP, DELTAEF1, FECD6, NIL2A, PPCD3}, MKI67 (marker of proliferation Ki-67) [NCBI Gene 4288] {aka KIA, MIB-, MIB-1, PPP1R105}, Krt18 (keratin 18) [NCBI Gene 16668] {aka CK18, K18, Krt1-18}, ETS1 (ETS proto-oncogene 1, transcription factor) [NCBI Gene 2113] {aka ETS-1, EWSR2, c-ets-1, p54}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, TRIM59 (tripartite motif containing 59) [NCBI Gene 286827] {aka IFT80L, MRF1, RNF104, TRIM57, TSBF1}, ELF1 (E74 like ETS transcription factor 1) [NCBI Gene 1997] {aka EFTUD1, RIA1}, Krt19 (keratin 19) [NCBI Gene 16669] {aka CK-19, EndoC, K19, Krt-1.19, Krt1-19}, TRAT1 (T cell receptor associated transmembrane adaptor 1) [NCBI Gene 50852] {aka HSPC062, TCRIM, TRIM, pp29/30}, GLG1 (golgi glycoprotein 1) [NCBI Gene 2734] {aka CFR-1, ESL-1, MG-160, MG160}, FPR1 (formyl peptide receptor 1) [NCBI Gene 2357] {aka FMLP, FPR}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, Cd79a (CD79A antigen (immunoglobulin-associated alpha)) [NCBI Gene 12518] {aka Ig-alpha, Iga, Igalpha, Ly-54, Ly54, mb-1}, OSM (oncostatin M) [NCBI Gene 5008], SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, MXI1 (MAX interactor 1, dimerization protein) [NCBI Gene 4601] {aka MAD2, MXD2, MXI, bHLHc11}, Ms4a1 (membrane-spanning 4-domains, subfamily A, member 1) [NCBI Gene 12482] {aka Cd20, Ly-44, Ms4a2}, Cd68 (CD68 antigen) [NCBI Gene 12514] {aka Lamp4, Scard1, gp110}, Col1a1 (collagen, type I, alpha 1) [NCBI Gene 12842] {aka Col1a-1, Cola-1, Cola1, Mov-13, Mov13}, FCER2 (Fc epsilon receptor II) [NCBI Gene 2208] {aka BLAST-2, CD23, CD23A, CLEC4J, FCE2, FCErII}, Tyrobp (TYRO protein tyrosine kinase binding protein) [NCBI Gene 22177] {aka DAP12, KARAP, Ly83}, SNAI1 (snail family transcriptional repressor 1) [NCBI Gene 6615] {aka SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1}, Mzb1 (marginal zone B and B1 cell-specific protein 1) [NCBI Gene 69816] {aka 2010001M09Rik, PACAP, pERp1}, NFYB (nuclear transcription factor Y subunit beta) [NCBI Gene 4801] {aka CBF-A, CBF-B, HAP3, NF-YB}, IRF2 (interferon regulatory factor 2) [NCBI Gene 3660] {aka IRF-2}, Epcam (epithelial cell adhesion molecule) [NCBI Gene 17075] {aka CD326, EGP, EGP-2, Egp314, Ep-CAM, EpCAM1}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, SELE (selectin E) [NCBI Gene 6401] {aka CD62E, ELAM, ELAM1, ESEL, LECAM2, selectin-e}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, PCNA (proliferating cell nuclear antigen) [NCBI Gene 5111] {aka ATLD2}, SMAD3 (SMAD family member 3) [NCBI Gene 4088] {aka HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3}, TRIM16 (tripartite motif containing 16) [NCBI Gene 10626] {aka EBBP}, FOXP1 (forkhead box P1) [NCBI Gene 27086] {aka 12CC4, HSPC215, MFH, QRF1, hFKH1B}, TRIM44 (tripartite motif containing 44) [NCBI Gene 54765] {aka AN3, DIPB, HSA249128, MC7}, Pecam1 (platelet/endothelial cell adhesion molecule 1) [NCBI Gene 18613] {aka Cd31, PECAM-1, Pecam}, Lst1 (leukocyte specific transcript 1) [NCBI Gene 16988] {aka B144}, Fcer1a (Fc receptor, IgE, high affinity I, alpha polypeptide) [NCBI Gene 14125] {aka FcERI, Fce1a, Fcr-5, fcepsilonri}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, ITGAV (integrin subunit alpha V) [NCBI Gene 3685] {aka CD51, IDNDC, MSK8, VNRA, VTNR}, Vwf (Von Willebrand factor) [NCBI Gene 22371] {aka 6820430P06Rik, B130011O06Rik, C630030D09, F8VWF, VWD}, BCL6 (BCL6 transcription repressor) [NCBI Gene 604] {aka BCL5, BCL6A, LAZ3, ZBTB27, ZNF51}, Cd3e (CD3 antigen, epsilon polypeptide) [NCBI Gene 12501] {aka CD3, CD3epsilon, T3e}, IRF3 (interferon regulatory factor 3) [NCBI Gene 3661] {aka IIAE7}
- **Diseases:** adenomas (MESH:D000236), tumorigenesis (MESH:D063646), digestive tract malignancy (MESH:D004828), GC (MESH:D013274), cervical and hepatocellular carcinomas (MESH:D002575), adenocarcinomas (MESH:D000230), Cancer (MESH:D009369), gastrointestinal malignancies (MESH:D005770), lymph node (MESH:D000072717), LNM (MESH:D008207), aneuploidy (MESH:D000782), hepatocellular carcinoma (MESH:D006528), metastases (MESH:D009362)
- **Chemicals:** nucleotide (MESH:D009711), CCK-8 (MESH:D012844), water (MESH:D014867), fluorine (MESH:D005461), SDS (MESH:D012967), acid (MESH:D000143), oxygen (MESH:D010100), linoleic acid (MESH:D019787), streptomycin (MESH:D013307), Paclitaxel (MESH:D017239), polybrene (MESH:D006583), lipid (MESH:D008055), paraformaldehyde (MESH:C003043), ubiquinone (MESH:D014451), taurine (MESH:D013654), CO2 (MESH:D002245), glutamine (MESH:D005973), docetaxel (MESH:D000077143), halogen (MESH:D006219), Gemcitabine (MESH:D000093542), hydrogen (MESH:D006859), penicillin (MESH:D010406), puromycin (MESH:D011691), DMEM (-), cisplatin (MESH:D002945), hypotaurine (MESH:C003949), crystal violet (MESH:D005840), TCA (MESH:D014238), CoA (MESH:D003065), fatty acid (MESH:D005227), thiamine (MESH:D013831)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** E121D
- **Cell lines:** CCK-8 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_2873), AGS — Homo sapiens (Human), Gastric adenocarcinoma, Cancer cell line (CVCL_0139), HGC-27 — Homo sapiens (Human), Gastric carcinoma, Cancer cell line (CVCL_1279)

## Full text

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## Figures

13 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12916669/full.md

## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12916669/full.md

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Source: https://tomesphere.com/paper/PMC12916669