# Case Report: Cystic fibrosis transmembrane conductance regulator gene heterozygous variation presenting with abdominal pain and hepatopancreatic lesions in a child

**Authors:** Xiu Lu, Lidong Ning, Hong Zhen, Ming Liang, Yulan Han, Hongyan Wei, Lingdong Zeng, Lihong Wei, Liqin Tan

PMC · DOI: 10.3389/fped.2025.1707993 · Frontiers in Pediatrics · 2026-02-05

## TL;DR

A 4-year-old girl with a rare CFTR gene mutation presented with abdominal pain and liver-pancreas issues, highlighting the need for early diagnosis in cystic fibrosis.

## Contribution

A previously unreported CFTR gene mutation (chr7:117250723 G > T) is identified as potentially pathogenic in a child with atypical CF symptoms.

## Key findings

- The patient had elevated pancreatic enzymes and imaging showed liver and pancreatic abnormalities.
- Whole-exome sequencing revealed a novel CFTR mutation (chr7:117250723 G > T) not previously reported in the literature.
- Treatment with octreotide and enzyme replacement therapy resolved symptoms, with stable follow-up outcomes.

## Abstract

Cystic fibrosis (CF) is an autosomal recessive disorder caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene, leading to multi-system involvement.

A 4-year-old girl presented with a 2-day history of abdominal pain. Clinical manifestations included recurrent epigastric pain and vomiting. Physical examination revealed abdominal distension, mild periumbilical tenderness, and hepatomegaly (liver palpable 4 cm below the right costal margin). Laboratory tests showed elevated pancreatic enzymes: serum amylase 607 U/L, lipase 634 U/L, and pancreatic amylase 252 U/L (all >3 times the upper limit of normal). Abdominal ultrasound demonstrated diffuse hepatic lesions and uneven echogenicity in pancreatic parenchyma. Computed tomography revealed chronic liver disease changes, possible cirrhosis and a slightly enlarged spleen. Hepatobiliary histopathological biopsy indicated biliary obstruction. Whole-exome sequencing identified CFTR allele variants c.3139G > T (paternal source) and c.1409T > A (maternal source). Comparative analysis with the existing literature verified that the G > T mutation at chromosome 7 (chr7):117250723 was previously unreported. Treatment with octreotide, omeprazole, and pancreatic enzyme replacement therapy led to symptom resolution. At follow-up, her condition remained stable: height=109 cm (10th to 25th percentile), weight=18.8 kg (25th to 50th percentile) and stable condition.

The clinical manifestations of CF are diverse, and digestive tract symptoms are common; therefore, early identification and diagnosis are required. As chr7: 117250723 G > T may be a pathogenic gene, long-term follow-up is needed.

## Linked entities

- **Genes:** CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080]
- **Chemicals:** octreotide (PubChem CID 448601), omeprazole (PubChem CID 4594)
- **Diseases:** cystic fibrosis (MONDO:0009061)

## Full-text entities

- **Genes:** GGTLC5P (gamma-glutamyltransferase light chain 5 pseudogene) [NCBI Gene 653590] {aka GGT}, CFTR [NCBI Gene 100009471], CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080] {aka ABC35, ABCC7, CF, CFTR/MRP, MRP7, TNR-CFTR}, GPT (glutamic--pyruvic transaminase) [NCBI Gene 2875] {aka AAT1, ALT, ALT1, GPT1, SGPT}, CELA3A (chymotrypsin like elastase 3A) [NCBI Gene 10136] {aka ELA3, ELA3A}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, GGT1 (gamma-glutamyltransferase 1) [NCBI Gene 2678] {aka CD224, D22S672, D22S732, GGT, GGT 1, GGTD}
- **Diseases:** trauma (MESH:D014947), respiratory infections (MESH:D012141), inflammation (MESH:D007249), Autoimmune liver disease (MESH:D008107), cirrhosis (MESH:D005355), epigastric pain (MESH:D010146), bronchial obstruction (MESH:D002283), sinusitis (MESH:D012852), lung disease (MESH:D008171), abdominal pain (MESH:D015746), liver fibrosis (MESH:D008103), CF (MESH:D003550), hepatitis B (MESH:D006509), Acute pancreatitis (MESH:D010195), lymphadenopathy (MESH:D008206), nodular opacities (MESH:D003318), rash (MESH:D005076), hepatopancreatic lesions (MESH:D009059), autoimmune (MESH:D001327), splenomegaly (MESH:D013163), hemorrhage (MESH:D006470), jaundice (MESH:D007565), diarrhoea (MESH:D003967), stenosis (MESH:D003251), airway (MESH:D000402), genetic metabolic diseases (MESH:D008659), convulsions (MESH:D012640), autosomal recessive disorder (MESH:D030342), fever (MESH:D005334), Wilson's disease (MESH:D006527), pancreatic exocrine dysfunction (MESH:C565225), vomiting (MESH:D014839), atelectasis (MESH:D001261), pancreatic insufficiency (MESH:D010188), thrombosis (MESH:D013927), rare (MESH:D035583), malabsorption (MESH:D008286), fibrous tissue hyperplasia (MESH:C537974), hepatomegaly (MESH:D006529), oedema (MESH:C536897), infection (MESH:D007239), gastrointestinal (MESH:D005767), cholestasis (MESH:D002779), alpha-1-antitrypsin deficiency (MESH:D019896), hepatobiliary lesions (MESH:D004066), food allergies (MESH:D005512), abdominal distension (MESH:D000007), hepatic lesions (MESH:D056486), biliary injury (MESH:D001658), tenderness (MESH:D063806), allergies (MESH:D004342), necrosis (MESH:D009336), autoimmune hepatitis (MESH:D019693), nodular lesion (MESH:D020518)
- **Chemicals:** azithromycin (MESH:D017963), bilirubin (MESH:D001663), water (MESH:D014867), pancreatic (MESH:D010187), chloride (MESH:D002712), octreotide (MESH:D015282), DBIL (-), H&amp;E (MESH:D006371), bile acids (MESH:D001647), hematoxylin (MESH:D006416), omeprazole (MESH:D009853), bicarbonate (MESH:D001639), ATP (MESH:D000255), eosin (MESH:D004801)
- **Species:** Bifidobacterium (genus) [taxon 1678], Homo sapiens (human, species) [taxon 9606], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986]
- **Mutations:** G > T, F508del, G > T, 117250723 G > T, p.Val470Glu

## Full text

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## References

26 references — full list in the complete paper: https://tomesphere.com/paper/PMC12916658/full.md

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Source: https://tomesphere.com/paper/PMC12916658