# The association between autism spectrum disorder and congenital malformations: a population-based nested case-control study

**Authors:** Rony Cleper, Ori Kapra, Nadav Goldental, Raz Gross

PMC · DOI: 10.1038/s41380-025-03302-8 · Molecular Psychiatry · 2025-10-15

## TL;DR

This study finds that certain birth defects are more common in children later diagnosed with autism, suggesting possible early markers for the condition.

## Contribution

The study identifies sex-specific congenital malformations as potential early markers for autism spectrum disorder.

## Key findings

- Congenital malformations are more prevalent in children with autism compared to controls.
- Genitourinary malformations in males and circulatory malformations in females are specifically linked to autism.
- These malformations could serve as early markers for autism risk and guide future research.

## Abstract

We examined whether specific congenital malformations (CM) detected at birth are associated with increased likelihood of autism spectrum disorder (ASD), by a case-control study nested within a 12-year birth cohort derived from the Israel National Birth Registry. The cohort included all registered ASD cases (n = 2099) and 1:1 age- and sex- matched controls. Overall, CM were more prevalent in the ASD group as compared with controls [odds ratio (OR) 1.75, 95% confidence interval (CI) 1.29–2.38]. This association remained robust after adjusting for birth weight, parental age, parental ethnicity, and maternal immigration [adjusted OR (aOR) 1.61, 95% CI 1.14–2.29]. The most prevalent CM types among the ASD group were circulatory system (2.1 vs. 1.2% among controls) and urogenital organs (1.8 vs. 0.8%). The association between ASD and genital CM was limited to males and persisted in the adjusted models (aOR 2.24, 95% CI 1.16–4.34). In the stratified by sex analysis, a strong association between all non-genitourinary CM and ASD was found in females (aOR 3.47, 95% CI 1.13–10.65). In conclusion, CM, most notably genitourinary in males exclusively, and others (mostly circulatory) in females, are more prevalent in newborns later diagnosed with ASD, as compared with age- and sex-matched controls. These sex-specific CM might represent useful pre- and postnatal markers of ASD, and their presence in newborns at-risk of ASD might indicate earlier and more frequent neurodevelopmental assessments. Our findings might also guide future research of plausible genetic, epigenetic, and prenatal underpinnings of ASD.

## Linked entities

- **Diseases:** autism spectrum disorder (MONDO:0005258)

## Full-text entities

- **Diseases:** ASD (MESH:D000067877), CM (OMIM:163000), genital CM (MESH:D000013)

## Full text

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## Figures

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## References

2 references — full list in the complete paper: https://tomesphere.com/paper/PMC12916474/full.md

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Source: https://tomesphere.com/paper/PMC12916474