# Unique chicken B cell development: species-specific mechanisms and contradictory requirements of B cell receptor for post-hatched B cell development

**Authors:** Seung Je Woo, Thirubasyini Songodan, Jae Yong Han

PMC · DOI: 10.3389/fimmu.2026.1755331 · Frontiers in Immunology · 2026-02-05

## TL;DR

Chicken B cell development differs from mammals, using a unique three-stage process involving the bursa of Fabricius and alternative mechanisms for antibody diversity.

## Contribution

The paper reveals paradoxical BCR signaling requirements and alternative pathways in post-hatched chicken B cell development.

## Key findings

- Chicken B cells use gene conversion instead of V(D)J recombination for antibody diversification.
- JH knockout chickens lack post-hatched B cells, while RAG1 knockout chickens maintain them via alternative pathways.
- Single-cell RNA sequencing identified new chicken B cell subpopulations and molecular signatures.

## Abstract

Chicken B cell development represents a remarkable evolutionary divergence from mammalian paradigms, featuring unique three-stage ontogeny centered on the bursa of Fabricius, an avian-specific primary B cell lymphoid organ. Unlike mammals where B cells develop continuously in bone marrow, chickens utilize a temporally restricted program spanning pre-bursal (E5-E14), bursal (E8-hatching), and post-bursal phases (hatching-bursal involution), each characterized by distinct molecular mechanisms and anatomical sites. In this review, we documented chicken B cell development in three developmental phases (pre-bursal to post-bursal phases) and compared it with mammalian B cell development mostly in humans as a representative mammalian model. In chicken, while the embryonic bursa of Fabricius serves as the primary B cell receptor (BCR)-dependent B cell developmental organ, it also supports BCR-independent early colonization followed by extensive activation-induced cytidine deaminase (AID)-mediated gene conversion rather than V(D)J recombination for antibody diversification. Recent gene knockout studies reveal paradoxical BCR signaling requirements for post-hatched chicken B cell development, with JH knockout chickens lacking post-hatched B cells, while recombination activating gene 1 (RAG1) knockout chickens maintain post-hatched bursal B cell populations through alternative pathways. Single-cell RNA sequencing has identified previously unrecognized chicken B cell subpopulations and provided molecular signatures for bursal and post-bursal B cells, addressing longstanding phenotypic marker limitations. These findings demonstrate that effective chicken humoral immunity can be achieved through alternative evolutionary strategies, with reduced dependence on RAG1 activity compared to mammalian systems, providing new perspectives on immune system evolution and adaptive immunity mechanisms.

## Linked entities

- **Genes:** HJV (hemojuvelin BMP co-receptor) [NCBI Gene 148738], RAG1 (recombination activating 1) [NCBI Gene 5896], AICDA (activation induced cytidine deaminase) [NCBI Gene 57379]
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** FOXO1 (forkhead box O1) [NCBI Gene 374231] {aka FOXO1A}, UNG (uracil DNA glycosylase) [NCBI Gene 374010], CD8A (CD8a molecule) [NCBI Gene 428800] {aka CD8, RHACD8-4}, TNFSF13B (TNF superfamily member 13b) [NCBI Gene 10673] {aka BAFF, BLYS, CD257, TALL-1, TALL1, THANK}, CD79B (CD79b molecule) [NCBI Gene 419940] {aka B29}, VH26L1 (Immunoglobulin heavy chain V-III region VH26-like 1) [NCBI Gene 431524], FOXO3 (forkhead box O3) [NCBI Gene 421769], RAG1 (recombination activating 1) [NCBI Gene 5896] {aka RAG-1, RNF74}, TAF1 (TATA-box binding protein associated factor 1) [NCBI Gene 422204], BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 613] {aka ALL, BCR1, CML, D22S11, D22S662, PHL}, CXCR4 (C-X-C motif chemokine receptor 4) [NCBI Gene 395324], IGLL1 (immunoglobulin lambda-like polypeptide 1) [NCBI Gene 416928] {aka IGLV, IgL}, STAT5A (signal transducer and activator of transcription 5A) [NCBI Gene 395556] {aka STAT5, STAT5B}, IL21 (interleukin 21) [NCBI Gene 554218] {aka IL-21, interleukin-21}, POLN (DNA polymerase nu) [NCBI Gene 422892], RAG2 (recombination activating gene 2) [NCBI Gene 423165] {aka Rag-2}, IKZF1 (IKAROS family zinc finger 1) [NCBI Gene 395974] {aka IKAROS, ZNFN1A1}, MSH6 (mutS homolog 6) [NCBI Gene 421291], CXCR5 (C-X-C motif chemokine receptor 5) [NCBI Gene 419784] {aka AvCRL1, BLR1, CRL1}, KMT2A (lysine methyltransferase 2A) [NCBI Gene 414897] {aka MLL}, CTNNB1 (catenin beta 1) [NCBI Gene 395964] {aka CHBCAT, beta-catenin}, PRDM1 (PR/SET domain 1) [NCBI Gene 445340] {aka BLIMP1, Blimp-1, cBlimp-1}, JCHAIN (joining chain of multimeric IgA and IgM) [NCBI Gene 374117] {aka IGJ}, TET3 (tet methylcytosine dioxygenase 3) [NCBI Gene 425829], CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 395180] {aka SDF-1, SDF1}, IL7R (interleukin 7 receptor) [NCBI Gene 426054] {aka CHIL-7Ralpha}, CD4 (CD4 molecule) [NCBI Gene 395362], IL10 (interleukin 10) [NCBI Gene 428264] {aka IL-10, interleukin-10}, MSH2 (mutS homolog 2) [NCBI Gene 378799], DCTN2 (dynactin subunit 2) [NCBI Gene 395587] {aka P50}, GALT (galactose-1-phosphate uridylyltransferase) [NCBI Gene 431509], RAG1 (recombination activating 1) [NCBI Gene 423164] {aka RAG-1}, BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 416952], CD40 (CD40 molecule) [NCBI Gene 395385] {aka TNFSF5, chCD40}, AICDA (activation induced cytidine deaminase) [NCBI Gene 418257] {aka AID}, EBF1 (EBF transcription factor 1) [NCBI Gene 395512] {aka EBF, cEBF1}, POLQ (DNA polymerase theta) [NCBI Gene 418326], TXNDC5 (thioredoxin domain containing 5) [NCBI Gene 420867], CD8B (CD8B molecule) [NCBI Gene 396175] {aka CD8-beta, CD8B1, CD8BP}, IRF8 (interferon regulatory factor 8) [NCBI Gene 396385] {aka ICSBP, ICSBP1}, CD40LG (CD40 ligand) [NCBI Gene 395485] {aka CD154, CD40L, TNFSF5}, SOX5 (SRY-box 5) [NCBI Gene 418195], CD27 (CD27 molecule) [NCBI Gene 939] {aka S152, S152. LPFS2, T14, TNFRSF7, Tp55}, PAX5 (paired box 5) [NCBI Gene 387330] {aka PAX-5, Pax5B}, RAD51 (RAD51 recombinase) [NCBI Gene 396086] {aka RAD51A}, EXO1 (exonuclease 1) [NCBI Gene 421505], XBP1 (X-box binding protein 1) [NCBI Gene 416918]
- **Diseases:** autoimmune (MESH:D001327), CSR (MESH:C535296), immunodeficiency (MESH:D007153), granulomas (MESH:D006099), severe combined immunodeficiency (MESH:D016511)
- **Chemicals:** uracil (MESH:D014498), carbohydrate (MESH:D002241)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Gallid alphaherpesvirus 2 (Marek disease virus type 1, no rank) [taxon 10390], Homo sapiens (human, species) [taxon 9606], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Gallus gallus (bantam, species) [taxon 9031]
- **Mutations:** Cys-94-Cys
- **Cell lines:** DT40 — Gallus gallus (Chicken), Chicken bursal lymphoma, Cancer cell line (CVCL_0249)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12916377/full.md

## References

138 references — full list in the complete paper: https://tomesphere.com/paper/PMC12916377/full.md

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Source: https://tomesphere.com/paper/PMC12916377