# ACADL and ADH1B signify ketone body metabolic reprogramming in osteoarthritic synovium: insights from bioinformatics and animal model studies

**Authors:** Kuokuo Li, Bingshu Chen, Xun Yang, Yijun Yuan, Siyao Yang, Jinteng Liu, Jiawei Guo, Meng He

PMC · DOI: 10.3389/fmed.2026.1700784 · Frontiers in Medicine · 2026-02-03

## TL;DR

This study identifies ACADL and ADH1B as key genes in synovial ketone body metabolism linked to osteoarthritis, offering potential for early diagnosis and targeted therapies.

## Contribution

The study discovers ACADL and ADH1B as novel OA biomarkers and proposes progesterone and fomepizole as potential targeted therapies.

## Key findings

- ACADL and ADH1B are associated with synovial inflammation and lipid oxidation in OA.
- Progesterone and fomepizole show strong binding affinities to ACADL and ADH1B, respectively.
- Mouse models confirmed reduced protein levels in OA synovium.

## Abstract

Osteoarthritis (OA) is characterized by articular degeneration and chronic joint pain, partly resulting from synovial inflammation. Accumulating evidence suggests that alterations in the synovial ketone body metabolism (KBM) are closely associated with OA pathogenesis. This study aimed to investigate the metabolic changes in synovial tissues to optimize the treatment of clinical OA.

Analysis of OA and normal control synovial transcriptomic datasets extracted from the Gene Expression Omnibus (GEO) identified 808 differentially expressed genes (DEGs). These DEGs were integrated with KBM-related genes from the metabolic databases, yielding 50 candidates related to OA progression. Following enrichment analysis, protein-protein interaction network construction via STRING, and machine learning with expression analysis, two genes were identified as OA biomarkers: ACADL, encoding long-chain acyl-CoA dehydrogenase and ADH1B, alcohol dehydrogenase 1 B.

The nomogram based on these data revealed high accuracy in the training and validation sets. Functional analysis revealed that these genes function in lipid oxidation, a process critical for synovial cell energy metabolism, as well as in the redox balance that prevents oxidative stress from worsening OA inflammation. Immune infiltration analysis revealed that their expression significantly correlated with 21 immune subtypes, including pro-inflammatory M1 macrophages and Th17 cells, which drive synovial inflammation. Molecular docking analysis identified progesterone and fomepizole as potential agents with satisfactory affinities for ACADL and ADH1B, respectively. Assessment of mouse models of OA confirmed a significant reduction in the synovium at the protein level.

ACADL and ADH1B link KBM abnormalities to immune dysregulation in the OA synovium. The nomogram enables the precise early diagnosis of OA, and progesterone and fomepizole are promising targeted therapies. These findings deepen the current understanding of OA pathogenesis and support the advancement of personalized treatments for clinical translation.

## Linked entities

- **Genes:** ACADL (acyl-CoA dehydrogenase long chain) [NCBI Gene 33], ADH1B (alcohol dehydrogenase 1B (class I), beta polypeptide) [NCBI Gene 125]
- **Chemicals:** progesterone (PubChem CID 5994), fomepizole (PubChem CID 3406)
- **Diseases:** osteoarthritis (MONDO:0005178)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Acadl (acyl-Coenzyme A dehydrogenase, long-chain) [NCBI Gene 11363] {aka LCAD}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, CYP2E1 (cytochrome P450 family 2 subfamily E member 1) [NCBI Gene 1571] {aka CPE1, CYP2E, P450-J, P450C2E}, MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599] {aka JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, ACADL (acyl-CoA dehydrogenase long chain) [NCBI Gene 33] {aka ACAD4, LCAD}, CXCL2 (C-X-C motif chemokine ligand 2) [NCBI Gene 2920] {aka CINC-2a, GRO2, GROb, MGSA-b, MIP-2a, MIP2}, DHRS9 (dehydrogenase/reductase 9) [NCBI Gene 10170] {aka 3-alpha-HSD, 3ALPHA-HSD, RDH-TBE, RDH15, RDHL, RDHTBE}, Prkaa2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 78975] {aka Ampk, Ampka2}, ADH1B (alcohol dehydrogenase 1B (class I), beta polypeptide) [NCBI Gene 125] {aka ADH2, HEL-S-117}, CBR3 (carbonyl reductase 3) [NCBI Gene 874] {aka HEL-S-25, SDR21C2, hCBR3}, Pink1 (PTEN induced kinase 1) [NCBI Gene 298575], HCAR2 [NCBI Gene 369160], FOXO3 (forkhead box O3) [NCBI Gene 2309] {aka AF6q21, FKHRL1, FKHRL1P2, FOXO2, FOXO3A}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, NGF (nerve growth factor) [NCBI Gene 4803] {aka Beta-NGF, HSAN5, NGFB}, EGR1 (early growth response 1) [NCBI Gene 1958] {aka AT225, G0S30, KROX-24, NGFI-A, TIS8, ZIF-268}, ADM (adrenomedullin) [NCBI Gene 133] {aka AM, PAMP}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, AKR1A1 (aldo-keto reductase family 1 member A1) [NCBI Gene 10327] {aka ALDR1, ALR, ARM, DD3, HEL-S-6}, CYP4F3 (cytochrome P450 family 4 subfamily F member 3) [NCBI Gene 4051] {aka CPF3, CYP4F, CYPIVF3, LTB4H}, HADH (hydroxyacyl-CoA dehydrogenase) [NCBI Gene 3033] {aka HAD, HADH1, HADHSC, HCDH, HHF4, MSCHAD}, PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}
- **Diseases:** joint pain (MESH:D018771), joint disease (MESH:D007592), weight loss (MESH:D015431), Immune (MESH:D007154), synovitis (MESH:D013585), overdoses (MESH:D062787), joint destruction (MESH:D008105), meniscus (MESH:D000070600), articular degeneration (MESH:D009410), alcoholic liver disease (MESH:D008108), chronic joint pain (MESH:D059350), lung injury (MESH:D055370), non-alcoholic fatty liver disease (MESH:D065626), pain (MESH:D010146), Disease (MESH:D004194), alveolar inflammation (MESH:D007249), cartilage degeneration (MESH:D002357), OA (MESH:D010003), KBM (MESH:D008659), acute (MESH:D000208), knee pain (MESH:D046788), hypoxic (MESH:D002534)
- **Chemicals:** flavin adenine dinucleotide (MESH:D005182), fatty acid (MESH:D005227), NAD (P) (MESH:D009249), CB (MESH:C063451), hematoxylin (MESH:D006416), KBM (-), H2O2 (MESH:D006861), Reactive oxygen species (MESH:D017382), NAD+ (MESH:D009243), elenium (MESH:D002707), fomepizole (MESH:D000077604), Tween-20 (MESH:D011136), polyvinylidene fluoride (MESH:C024865), N-acetylcysteine (MESH:D000111), lipid (MESH:D008055), ATP (MESH:D000255), citrate (MESH:D019343), bicinchoninic acid (MESH:C047117), ketone (MESH:D007659), polyacrylamide (MESH:C016679), xylene (MESH:D014992), nickel (MESH:D009532), ethylenediaminetetraacetic acid (MESH:D004492), NAPQI (MESH:C028473), cyclopeptide (MESH:D010456), phosphate (MESH:D010710), Acetaminophen (MESH:D000082), beta-hydroxybutyrate (MESH:D020155), paraffin (MESH:D010232), saline (MESH:D012965), Stylissatin A (MESH:C000614899), ethanol (MESH:D000431), ketone bodies (MESH:D007657), Progesterone (MESH:D011374), sodium dodecyl sulfate (MESH:D012967), acetyl-CoA (MESH:D000105), retinol (MESH:D014801), prostaglandin E2 (MESH:D015232)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Mus musculus (house mouse, species) [taxon 10090]

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12915690/full.md

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Source: https://tomesphere.com/paper/PMC12915690