# Epigenetic and microbiome responses to greens supplementation in obese older adults: results from a randomized crossover-controlled trial

**Authors:** Laura A. Robinson, Aidan M. Cavanah, Sarah Lennon, Madison L. Mattingly, William Van Der Pol, Kevin W. Huggins, Michael W. Greene, Michael D. Roberts, Andrew D. Frugé

PMC · DOI: 10.3389/fnut.2026.1750030 · Frontiers in Nutrition · 2026-02-04

## TL;DR

A 30-day greens supplement in obese older adults changed some epigenetic aging markers and gut microbes, but had no major effects on overall health or body composition.

## Contribution

This study is the first to explore the effects of a greens supplement on epigenetic aging and gut microbiome in obese older adults using a crossover design.

## Key findings

- Epigenetic age increased using the Horvath clock but improved with newer clocks like AdaptAge and DamAge.
- Gut microbiome diversity was stable, but specific taxa like Bilophila and Desulfobacterota changed with supplementation.
- No significant changes were observed in metabolic health, body composition, or psychosocial outcomes.

## Abstract

Aging is influenced by genetic, environmental, and lifestyle factors. Preliminary studies suggest that fruit and vegetable-based dietary supplements may reduce inflammation and oxidative stress, key factors in aging. Greens-based supplements typically contain concentrated extracts of leafy greens, fruits, vegetables, and bioactive phytochemicals, providing micronutrients and polyphenols that may influence aging-related pathways. This exploratory study evaluated the effects of a 30-day greens-based supplement on epigenetic markers of aging and metabolic health in adults aged 50–65 years with body mass index (BMI) >30 kg/m2, using a 60-day randomized crossover design. Participants were randomized to immediate or delayed supplementation. During the 30-day intervention period, participants consumed a daily greens supplement. Primary outcomes included peripheral blood mononuclear cell DNA methylation and epigenetic age (Horvath, PCGrimAge, AdaptAge, and DamAge). Secondary measures included clinical metabolic biomarkers, microbiome diversity, breath hydrogen and methane, body composition, actigraphy, dietary intake, and quality of life questionnaires [RAND 12 item short form questionnaire (SF-12), and 21-item Depression, Anxiety, and Stress Scale (DASS-21)]. Twenty-one participants began the protocol (65% female, mean age 58.4 ± 5.3 years, mean BMI 38.1 ± 8 kg/m2). Nineteen participants completed the study. Horvath clock data indicated that biological age paradoxically increased during the supplementation period, whereas newer-generation clocks (AdaptAge, DamAge) demonstrated trends toward improved outcomes. Gut microbiome alpha diversity remained stable; taxa of interest, including Bilophila (p = 0.037) and Desulfobacterota (p = 0.031) changed with supplementation. Body composition, metabolic biomarkers, dietary intake, breath gases, sleep, and psychosocial measures were unchanged during the study. Exploratory pre-to-post supplementation change score correlations found no significant associations between epigenetic clocks and secondary outcomes, except for an inverse relationship between Faith's phylogenetic diversity and fasting blood glucose (rs = −0.81, p < 0.001). In summary, 30 days of greens-based supplementation led to selective changes in epigenetic aging markers and individual gut microbial taxa, without significant effects on overall microbiome diversity, metabolic health markers, or body composition. Additionally, exploratory correlations suggest potential links between changes in microbial diversity and glycemic control following greens supplementation.

## Linked entities

- **Diseases:** obesity (MONDO:0011122)

## Full-text entities

- **Genes:** CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}
- **Diseases:** metabolic dysfunction (MESH:D008659), visceral adiposity (MESH:D007418), chronic disease (MESH:D002908), Depression (MESH:D003866), obese (MESH:D009765), GI discomfort (MESH:D006470), impaired glycemic control (MESH:D007174), Overweightness (MESH:D050177), Anxiety, and Stress (MESH:D001007), CMP (MESH:D001308), Gastrointestinal symptoms (MESH:D012817), inflammation (MESH:D007249)
- **Chemicals:** inulin (MESH:D007444), H2 (MESH:D006859), vitamin C (MESH:D001205), folate (MESH:D005492), chloride (MESH:D002712), blood glucose (MESH:D001786), flavonoids (MESH:D005419), magnesium (MESH:D008274), Cholesterol (MESH:D002784), Glucose (MESH:D005947), carotenoids (MESH:D002338), carbon dioxide (MESH:D002245), water (MESH:D014867), polyphenols (MESH:D059808), Lipid (MESH:D008055), vitamin D3 (MESH:D002762), CH4 (MESH:D008697), Carbohydrate (MESH:D002241), Greens (MESH:C024537), vitamin K2 (MESH:D024482), triglycerides (MESH:D014280), green tea extract (MESH:C045651), B-complex vitamins (B1, B2, B6, B12, (-), Potassium (MESH:D011188), maltodextrin (MESH:C008315), sugar (MESH:D000073893)
- **Species:** Petroselinum crispum (parsley, species) [taxon 4043], Enterobacter (genus) [taxon 547], Phocaeicola vulgatus (species) [taxon 821], Actinomycetota (actinobacteria, phylum) [taxon 201174], gut metagenome (species) [taxon 749906], Bacillota (clostridial firmicutes, phylum) [taxon 1239], Desulfovibrio (genus) [taxon 872], Curcuma longa (turmeric, species) [taxon 136217], Actinomyces (genus) [taxon 1654], PX clade (clade) [taxon 569578], Pseudomonadota (proteobacteria, phylum) [taxon 1224], Adlercreutzia (genus) [taxon 447020], Collinsella (genus) [taxon 102106], Alistipes putredinis (species) [taxon 28117], Chlorella vulgaris (species) [taxon 3077], Brassica oleracea var. viridis (collards, varietas) [taxon 3713], Bacteroides fragilis (species) [taxon 817], Homo sapiens (human, species) [taxon 9606], Bifidobacterium (genus) [taxon 1678], Alistipes onderdonkii (species) [taxon 328813], Limnospira platensis (species) [taxon 118562], Beta vulgaris (beet, species) [taxon 161934], Lachnospira (genus) [taxon 28050], Eggerthella (genus) [taxon 84111], Stevia (genus) [taxon 55669], Spinacia oleracea (spinach, species) [taxon 3562]

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## References

62 references — full list in the complete paper: https://tomesphere.com/paper/PMC12915338/full.md

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Source: https://tomesphere.com/paper/PMC12915338