# A guide to selecting high-performing antibodies for Optineurin (UniProt ID: Q96CV9) for use in western blot, immunoprecipitation, and immunofluorescence

**Authors:** Vera Ruíz Moleón, Riham Ayoubi, Charles Alende, Maryam Fothouhi, Joel Ryan, Sara González Bolívar, Donovan Worrall, Thomas M Durcan, Claire M Brown, Vincent Francis, Peter S McPherson, Carl Laflamme, Andrew Buchanan, Deborah Moshinsky

PMC · DOI: 10.12688/f1000research.169966.1 · F1000Research · 2025-10-17

## TL;DR

This paper provides a guide to selecting reliable antibodies for studying the protein Optineurin, which is linked to neurodegenerative diseases.

## Contribution

The study evaluates eight commercial antibodies for Optineurin using standardized protocols and shares results openly to improve antibody reproducibility.

## Key findings

- Eight commercial antibodies for Optineurin were tested using standardized protocols.
- Results are shared openly to help researchers choose high-performing antibodies.
- The study is part of a collaborative initiative to improve antibody reproducibility.

## Abstract

Optineurin (OPTN) is a multifunctional cytoplasmic adaptor protein implicated in maintaining neuronal homeostasis through its roles in selective autophagy, vesicle trafficking, and regulation of inflammatory signaling. Mutations in the
OPTN gene are causally linked to several neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS) and primary open-angle glaucoma. Here we have eight optineurin commercial antibodies for western blot, immunoprecipitation, and immunofluorescence using a standardized experimental protocol based on comparing read-outs in knockout cell lines and isogenic parental controls. These studies are part of a larger, collaborative initiative seeking to address antibody reproducibility issues by characterizing commercially available antibodies for human proteins and publishing the results openly as a resource for the scientific community. While the use of antibodies and protocols vary between laboratories, we encourage readers to use this report as a guide to select the most appropriate antibodies for their specific needs.

## Linked entities

- **Genes:** OPTN (optineurin) [NCBI Gene 10133]
- **Proteins:** LOC100136496 (FIP2-like)
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976), primary open-angle glaucoma (MONDO:0005338)

## Full-text entities

- **Genes:** MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}, OPTN (optineurin) [NCBI Gene 478003], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, TBK1 (TANK binding kinase 1) [NCBI Gene 29110] {aka AIARV, FTDALS4, IIAE8, NAK, T2K}, OPTN (optineurin) [NCBI Gene 10133] {aka ALS12, FIP2, GLC1E, HIP7, HYPL, NRP}
- **Diseases:** neuronal death (MESH:D009410), ALS (MESH:D000690), primary open-angle glaucoma (MESH:D005902), neuroinflammation (MESH:D000090862), Cancer (MESH:D009369), mitochondrial dysfunction (MESH:D028361), neurodegenerative (MESH:D019636), inflammatory (MESH:D007249)
- **Chemicals:** DAPI (MESH:C007293), Tween 20 (MESH:D011136), PFA (MESH:C003043), CO 2 (MESH:D002245), glycerol (MESH:D005990), Alexa-555 (-), Glycine (MESH:D005998), SDS (MESH:D012967), Alexa Fluor 555 (MESH:C000608607), HCl (MESH:D006851), Ponceau (MESH:C032756), TBS (MESH:D013725), water (MESH:D014867), Triton X-100 (MESH:D017830), polyacrylamide (MESH:C016679), NP-40 (MESH:C010615), EDTA (MESH:D004492), NaCl (MESH:D012965), sodium deoxycholate (MESH:D003840)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Mycoplasma (genus) [taxon 2093], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** U2OS — Homo sapiens (Human), Osteosarcoma, Cancer cell line (CVCL_0042)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12914170/full.md

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12914170/full.md

## References

14 references — full list in the complete paper: https://tomesphere.com/paper/PMC12914170/full.md

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Source: https://tomesphere.com/paper/PMC12914170