# Comparative proteomics of bark and xylem provides insights into age-dependent corticular photosynthesis in Eucalyptus grandis

**Authors:** Felipe Alexsander Rodrigues da Silva, Daniele Cristine de Lima, Mônica T. Veneziano Labate, Ilara Gabriela Frasson Budzinski, Thais Regiani Cataldi, Carlos Alberto Labate

PMC · DOI: 10.3389/fpls.2026.1701400 · Frontiers in Plant Science · 2026-02-04

## TL;DR

This study explores how Eucalyptus grandis stems use photosynthesis in their bark to support growth and energy metabolism as the tree ages.

## Contribution

The paper provides new insights into age-dependent corticular photosynthesis and metabolic adaptations in Eucalyptus grandis vascular tissues.

## Key findings

- Chloroplasts are more abundant in younger bark, suggesting higher potential for local carbon fixation.
- Proteoform abundance patterns indicate reliance on glycolysis, the tricarboxylic acid cycle, and fermentation in hypoxic vascular tissues.
- Alcohol and aldehyde dehydrogenase proteoforms show differential abundance, supporting fermentative metabolism in younger bark.

## Abstract

Eucalyptus species are globally important for forestry due to rapid growth, adaptability, high biomass production, and contribution to carbon sequestration by storing atmospheric CO2 as biomass. However, the metabolic mechanisms sustaining growth under hypoxic conditions within woody vascular tissues remain unclear. Here, we investigate whether corticular photosynthesis helps sustain stem energy metabolism across two developmental stages in vascular tissues of Eucalyptus grandis.

We analyzed bark and xylem from 4- and 12-year-old clonal Eucalyptus grandis plants. Chloroplast abundance in bark was quantified by fluorescence microscopy, and both tissues were profiled by shotgun proteomics.

Chloroplasts were more abundant in younger bark and were not detected in xylem. A total of 3,113 non-redundant proteins were identified, and enrichment analysis indicated a consistent hypoxic response across tissues and ages, alongside age-specific metabolic processes. Proteoform abundance patterns implicated glycolysis, the tricarboxylic acid cycle, and fermentation pathways. Alcohol dehydrogenase and aldehyde dehydrogenase proteoforms showed differential abundance in xylem and younger bark, consistent with greater emphasis on fermentative metabolism in hypoxia-prone vascular tissues. Younger bark also exhibited higher abundance of Calvin–Benson cycle proteins, together with higher chloroplast numbers than older bark and xylem, indicating higher potential for local carbon fixation and oxygen availability in juvenile stems.

These findings underscore adaptive metabolic strategies of eucalyptus stems, refine current models of corticular photosynthesis and stem energy metabolism in fast-growing trees, and provide a molecular framework for future physiological studies in eucalyptus and other woody species.

## Linked entities

- **Proteins:** ATA1 (TAPETUM 1)
- **Species:** Eucalyptus grandis (taxon 71139)

## Full-text entities

- **Genes:** ALCOHOL DEHYDROGENASE [NCBI Gene 104417979]
- **Diseases:** hypoxic (MESH:D002534), hypoxia (MESH:D000860)
- **Chemicals:** iodoacetamide (MESH:D007460), cysteine (MESH:D003545), Acetyl-CoA (MESH:D000105), sucrose (MESH:D013395), PVPP (MESH:C077842), ammonium acetate (MESH:C018824), CO2 (MESH:D002245), phenol (MESH:D019800), ATP (MESH:D000255), water (MESH:D014867), lignin (MESH:D008031), ROS (MESH:D017382), malate (MESH:C030298), glucose (MESH:D005947), acetaldehyde (MESH:D000079), HCl (MESH:D006851), fumarate (MESH:D005650), SDS (MESH:D012967), DTT (MESH:D004229), NAD+ (MESH:D009243), thiourea (MESH:D013890), KCl (MESH:D011189), acetate (MESH:D000085), O2 (MESH:D010100), formic acid (MESH:C030544), sugar (MESH:D000073893), acids (MESH:D000143), methanol (MESH:D000432), Calvin (-), pyruvate (MESH:D019289), Methionine (MESH:D008715), polyacrylamide (MESH:C016679), acetone (MESH:D000096), carbohydrate (MESH:D002241), Carbon (MESH:D002244), TCA (MESH:D014233), trifluoroacetic acid (MESH:D014269), Triton X-100 (MESH:D017830), acetonitrile (MESH:C032159), nitrogen (MESH:D009584), urea (MESH:D014508), EDTA (MESH:D004492)
- **Species:** Eucalyptus grandis (rose gum, species) [taxon 71139]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12913457/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12913457/full.md

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Source: https://tomesphere.com/paper/PMC12913457