# In the diffuse large B-cell lymphoma microenvironment, SIRT1 is upregulated and correlated with a pro-inflammatory macrophage signature and autophagy-related gene expression

**Authors:** Miguel Resanoa, Peio Azcoaga, Naike Salvador, Alba Delgado, Claudia Rodiño, Matthieu Schoenhals, Mounia S. Braza

PMC · DOI: 10.3389/fimmu.2026.1701514 · Frontiers in Immunology · 2026-02-04

## TL;DR

This study explores how SIRT1 is linked to pro-inflammatory macrophages and autophagy in diffuse large B-cell lymphoma, suggesting it could be a new target for treatment.

## Contribution

The study identifies SIRT1 as a key player in the pro-inflammatory macrophage signature and autophagy in DLBCL, offering a novel therapeutic target.

## Key findings

- SIRT1 and SIRT3 are upregulated in DLBCL macrophages, with SIRT1 linked to pro-inflammatory M1 macrophages.
- Autophagy-related genes correlate with SIRT1 and SIRT3 expression in the DLBCL microenvironment.
- SIRT1 is specifically associated with inflammation-related genes and autophagy-related immune cells in DLBCL.

## Abstract

Diffuse large B-cell lymphoma (DLBCL) is an aggressive and heterogeneous blood cancer and one of the most frequent non-Hodgkin lymphomas of B-cell origin. As it has a complex, macrophage-rich immune microenvironment, we wanted to determine the role of autophagy, in which incoming threats are sequestered/removed and damaged cell constituents and debris are recycled, and metabolic sensors, such as sirtuins (SIRTs), in this cancer. Therefore, we determined the autophagy status in primary DLBCL samples using publicly available transcriptomic data and validated these results by immunohistochemistry and immunofluorescence analyses of patients’ tissue microarrays. We found that autophagy components and SIRTs were upregulated in the DLBCL microenvironment, particularly in the resting (M0) and pro-inflammatory (M1) macrophage subtypes. Moreover, the expression of autophagy factors was positively correlated with that of SIRT1 and SIRT3, which were both upregulated in macrophages. Specifically, SIRT1 was correlated with the expression of CD80 (M1 macrophage marker) and SIRT3 with the expression of M-CSF (M2 macrophage marker). Overall, in DLBCL samples, we observed a positive correlation between the expression of SIRT1 and of inflammation-related genes, and between SIRT3 and immunosuppression-related genes. Lastly, we confirmed in an independent DLBCL cohort that only SIRT1, but not SIRT3, was significantly associated with autophagy-related immune cells. Our study identified SIRT expression in macrophages of the DLBCL environment and specifically the importance of SIRT1 in the DLBCL M1 macrophage immune microenvironment. This opens an avenue for the potential translational exploitation of SIRT1 modulation as therapeutic target in this hematological malignancy.

## Linked entities

- **Genes:** SIRT1 (sirtuin 1) [NCBI Gene 23411], SIRT3 (sirtuin 3) [NCBI Gene 23410], CD80 (CD80 molecule) [NCBI Gene 941], CSF1 (colony stimulating factor 1) [NCBI Gene 1435]
- **Diseases:** diffuse large B-cell lymphoma (MONDO:0018905), DLBCL (MONDO:0018905)

## Full-text entities

- **Genes:** GBP3 (guanylate binding protein 3) [NCBI Gene 2635], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, CD40 (CD40 molecule) [NCBI Gene 958] {aka Bp50, CDW40, TNFRSF5, p50}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, MRC1 (mannose receptor C-type 1) [NCBI Gene 4360] {aka CD206, CLEC13D, CLEC13DL, MMR, MRC1L1, bA541I19.1}, PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1) [NCBI Gene 5562] {aka AMPK, AMPK alpha 1, AMPKa1}, CXCL11 (C-X-C motif chemokine ligand 11) [NCBI Gene 6373] {aka H174, I-TAC, IP-9, IP9, SCYB11, SCYB9B}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}, PDGFB (platelet derived growth factor subunit B) [NCBI Gene 5155] {aka IBGC5, PDGF-2, PDGF2, SIS, SSV, c-sis}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CD86 (CD86 molecule) [NCBI Gene 942] {aka B7-2, B7.2, B70, BU63, CD28LG2, CD86 v6}, NCAPD3 (non-SMC condensin II complex subunit D3) [NCBI Gene 23310] {aka CAP-D3, CAPD3, MCPH22, hCAP-D3, hHCP-6, hcp-6}, IGKV7-3 (immunoglobulin kappa variable 7-3 (pseudogene)) [NCBI Gene 28905] {aka B1, IGKV73}, MAP1LC3B (microtubule associated protein 1 light chain 3 beta) [NCBI Gene 81631] {aka ATG8F, LC3B, MAP1A/1BLC3, MAP1LC3B-a}, PPARA (peroxisome proliferator activated receptor alpha) [NCBI Gene 5465] {aka NR1C1, PPAR, PPAR-alpha, PPARalpha, hPPAR}, SIRT2 (sirtuin 2) [NCBI Gene 22933] {aka SIR2, SIR2L, SIR2L2}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, CCL18 (C-C motif chemokine ligand 18) [NCBI Gene 6362] {aka AMAC-1, AMAC1, CKb7, DC-CK1, DCCK1, MIP-4}, CXCL12 (C-X-C motif chemokine ligand 12) [NCBI Gene 6387] {aka IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1}, BECN1 (beclin 1) [NCBI Gene 8678] {aka ATG6, VPS30, beclin1}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, SIRT3 (sirtuin 3) [NCBI Gene 23410] {aka SIR2L3}, PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468] {aka CIMT1, FPLD3, GLM1, NR1C3, PPARG1, PPARG2}, CSF1R (colony stimulating factor 1 receptor) [NCBI Gene 1436] {aka BANDDOS, C-FMS, CD115, CSF-1R, CSFR, FIM2}, ATG5 (autophagy related 5) [NCBI Gene 9474] {aka APG5, APG5-LIKE, APG5L, ASP, SCAR25, hAPG5}, PIK3C3 (phosphatidylinositol 3-kinase catalytic subunit type 3) [NCBI Gene 5289] {aka VPS34, Vps34, hVps34}, ULK1 (unc-51 like autophagy activating kinase 1) [NCBI Gene 8408] {aka ATG1, ATG1A, UNC51, Unc51.1, hATG1}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, AMBRA1 (autophagy and beclin 1 regulator 1) [NCBI Gene 55626] {aka DCAF3, WDR94}, TLR4 (toll like receptor 4) [NCBI Gene 7099] {aka ARMD10, CD284, TLR-4, TOLL}, ATM (ATM serine/threonine kinase) [NCBI Gene 472] {aka AT1, ATA, ATC, ATD, ATDC, ATE}, TLR2 (toll like receptor 2) [NCBI Gene 7097] {aka CD282, TIL4}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, KRT20 (keratin 20) [NCBI Gene 54474] {aka CD20, CK-20, CK20, K20, KRT21}, ATG12 (autophagy related 12) [NCBI Gene 9140] {aka APG12, APG12L, FBR93, HAPG12}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, CARD8 (caspase recruitment domain family member 8) [NCBI Gene 22900] {aka CARDINAL, DACAR, DAKAR, NDPP, NDPP1, TUCAN}, SIRT7 (sirtuin 7) [NCBI Gene 51547] {aka SIR2L7}, CXCL9 (C-X-C motif chemokine ligand 9) [NCBI Gene 4283] {aka CMK, Humig, MIG, SCYB9, crg-10}, IRF8 (interferon regulatory factor 8) [NCBI Gene 3394] {aka H-ICSBP, ICSBP, ICSBP1, IMD32A, IMD32B, IRF-8}, PARG (poly(ADP-ribose) glycohydrolase) [NCBI Gene 8505] {aka PARG99}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}, SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, ORC1 (origin recognition complex subunit 1) [NCBI Gene 4998] {aka HSORC1, ORC1L, PARC1}, SIRT6 (sirtuin 6) [NCBI Gene 51548] {aka SIR2L6, hSIRT6}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CD80 (CD80 molecule) [NCBI Gene 941] {aka B7, B7-1, B7.1, BB1, CD28LG, CD28LG1}, ATG10 (autophagy related 10) [NCBI Gene 83734] {aka APG10, APG10L, ATG10S, pp12616}, CD68 (CD68 molecule) [NCBI Gene 968] {aka GP110, LAMP4, SCARD1}
- **Diseases:** acute lymphoblastic leukemia (MESH:D054198), age (MESH:D019588), toxicity (MESH:D064420), T-cell lymphoma (MESH:D016399), follicular lymphoma (MESH:D008224), atherosclerosis (MESH:D050197), mantle cell lymphoma (MESH:D020522), DLBCL (MESH:D016403), lymphoid malignancies (MESH:D008223), LN (MESH:D000072717), heart inflammatory disease (MESH:D006331), NHL (MESH:D008228), Tumor (MESH:D009369), AD (MESH:D000544), NK (MESH:D054066), anaplastic large cell lymphoma (MESH:D017728), chronic inflammation (MESH:D007249), chronic lymphocytic leukemia (MESH:D015451), blood cancer (MESH:D019337), metabolic disorders (MESH:D008659), M1 (MESH:D015470), hypoxia (MESH:D000860), tumorigenesis (MESH:D063646), Hodgkin's lymphoma (MESH:D006689), Burkitt-like lymphoma (MESH:D002051)
- **Chemicals:** amino acids (MESH:D000596), cambinol (MESH:C510718), fatty acids (MESH:D005227), curcumin (MESH:D003474), Sudan Black (-), fisetin (MESH:C017875), alcohol (MESH:D000438), 3,3' -diaminobenzidine (MESH:D015100), DAPI (MESH:C007293), glutamine (MESH:D005973), lipid (MESH:D008055), quercetin (MESH:D011794), EDTA (MESH:D004492), SRT1720 (MESH:C525422), lactate (MESH:D019344), SRT2104 (MESH:C584666), resveratrol (MESH:D000077185), biotin (MESH:D001710)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** rs3758391

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12913385/full.md

## References

76 references — full list in the complete paper: https://tomesphere.com/paper/PMC12913385/full.md

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Source: https://tomesphere.com/paper/PMC12913385