# TRIM16: a context-dependent E3 ligase in autophagy, oxidative stress, and immune regulation – from cancer and systemic disease

**Authors:** Hanchen Dong, Jiayu Jiang, Ke Ni, Qinhong Ren, Xinran Yang, Liang Shang, Baoshan Cai, Leping Li

PMC · DOI: 10.3389/fonc.2026.1743345 · Frontiers in Oncology · 2026-02-04

## TL;DR

TRIM16 is a versatile E3 ligase that regulates autophagy, stress, and immunity, acting as both a tumor suppressor and promoter depending on the context.

## Contribution

This review integrates recent findings to clarify TRIM16's context-dependent roles and therapeutic potential across multiple diseases.

## Key findings

- TRIM16 regulates oxidative stress and autophagy via the p62-KEAP1-NRF2 axis and lysophagy.
- TRIM16 acts as a tumor suppressor in most solid tumors but promotes pancreatic and hepatocellular carcinomas.
- TRIM16 protects against neurodegenerative and inflammatory diseases through quality control mechanisms.

## Abstract

TRIM16 is an atypical tripartite motif (TRIM) family E3 ligase that retains catalytic activity via its RING-like B-box domains, functioning primarily as a versatile molecular scaffold. This architecture enables TRIM16 to coordinate key cellular processes. These include oxidative stress responses (via the p62-KEAP1-NRF2 axis), secretory autophagy, lysophagy, and immune regulation, which collectively maintain cellular homeostasis. Emerging evidence highlights TRIM16 as a context-dependent regulator whose functions are shaped by cell type and microenvironment. In cancer, it acts as a tumor suppressor in most solid tumors by degrading oncoproteins and inducing cell cycle arrest, yet can paradoxically promote progression in pancreatic and hepatocellular carcinomas. Beyond oncology, TRIM16 protects against neurodegenerative, cardiovascular, and inflammatory diseases through quality control mechanisms. This review integrates recent advances to elucidate TRIM16’s molecular mechanisms and disease-specific functions, emphasizing its therapeutic and biomarker potential, and outlines future directions to decode its context-dependent actions for clinical translation.

## Linked entities

- **Genes:** TRIM16 (tripartite motif containing 16) [NCBI Gene 10626], GTF2H1 (general transcription factor IIH subunit 1) [NCBI Gene 2965], KEAP1 (kelch like ECH associated protein 1) [NCBI Gene 9817], GABPA (GA binding protein transcription factor subunit alpha) [NCBI Gene 2551]
- **Diseases:** cancer (MONDO:0004992)

## Full-text entities

- **Genes:** SIRT1 (sirtuin 1) [NCBI Gene 23411] {aka SIR2, SIR2L1, SIR2alpha}, MAP3K7 (mitogen-activated protein kinase kinase kinase 7) [NCBI Gene 6885] {aka CSCF, FMD2, MEKK7, TAK1, TGF1a}, MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}, LAMP1 (lysosome associated membrane protein 1) [NCBI Gene 3916] {aka CD107a, LAMPA, LGP120}, EGR2 (early growth response 2) [NCBI Gene 1959] {aka AT591, CMT1D, CMT4E, KROX20}, RUNX2 (RUNX family transcription factor 2) [NCBI Gene 860] {aka AML3, CBF-alpha-1, CBFA1, CCD, CCD1, CLCD}, CCL27 (C-C motif chemokine ligand 27) [NCBI Gene 10850] {aka ALP, CTACK, CTAK, ESKINE, ILC, PESKY}, MID1 (midline 1) [NCBI Gene 4281] {aka BBBG1, FXY, GBBB, GBBB1, MIDIN, OGS1}, BRAF (B-Raf proto-oncogene, serine/threonine kinase) [NCBI Gene 673] {aka B-RAF1, B-raf, BRAF-1, BRAF1, NS7, RAFB1}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, YAP1 (Yes1 associated transcriptional regulator) [NCBI Gene 10413] {aka COB1, YAP, YAP-1, YAP2, YAP65, YKI}, RIPK2 (receptor interacting serine/threonine kinase 2) [NCBI Gene 8767] {aka CARD3, CARDIAK, CCK, GIG30, RICK, RIP2}, GLRX3 (glutaredoxin 3) [NCBI Gene 10539] {aka GLRX4, GRX3, GRX4, PICOT, TXNL2, TXNL3}, NFKBIZ (NFKB inhibitor zeta) [NCBI Gene 64332] {aka I-kappa-B-zeta, IKBZ, INAP, IkappaB-zeta, MAIL, ikB-zeta}, SNCA (synuclein alpha) [NCBI Gene 6622] {aka NACP, PARK1, PARK4, PD1}, TPPP3 (tubulin polymerization promoting protein family member 3) [NCBI Gene 51673] {aka CGI-38, TPPP/p20, p20, p25gamma}, S100A10 (S100 calcium binding protein A10) [NCBI Gene 6281] {aka 42C, ANX2L, ANX2LG, CAL1L, CLP11, Ca[1]}, e2f1.L (E2F transcription factor 1 L homeolog) [NCBI Gene 100036852] {aka e2f1, xE2F}, SEC22B (SEC22 homolog B, vesicle trafficking protein) [NCBI Gene 9554] {aka ERS-24, SEC22L1}, TFEB (transcription factor EB) [NCBI Gene 7942] {aka ALPHATFEB, BHLHE35, TCFEB}, LGALS3 (galectin 3) [NCBI Gene 3958] {aka CBP35, GAL3, GALBP, GALIG, L31, LGALS2}, GCLC (glutamate-cysteine ligase catalytic subunit) [NCBI Gene 2729] {aka CNSHA7, GCL, GCS, GLCL, GLCLC}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, OTUD6B-AS1 (OTUD6B antisense RNA 1) [NCBI Gene 100506365] {aka GS1-251I9.4}, ELAVL1 (ELAV like RNA binding protein 1) [NCBI Gene 1994] {aka ELAV1, HUR, Hua, MelG}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 2146] {aka ENX-1, ENX1, EZH2b, KMT6, KMT6A, WVS}, PRDX1 (peroxiredoxin 1) [NCBI Gene 5052] {aka MSP23, NKEF-A, NKEFA, PAG, PAGA, PAGB}, DECR1 (2,4-dienoyl-CoA reductase 1) [NCBI Gene 1666] {aka DECR, NADPH, SDR18C1}, VIM (vimentin) [NCBI Gene 7431], IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, TRIM63 (tripartite motif containing 63) [NCBI Gene 84676] {aka CMH31, IRF, MURF1, MURF2, RNF28, SMRZ}, YKT6 (YKT6 vesicular SNARE protein) [NCBI Gene 10652], CTSD (cathepsin D) [NCBI Gene 1509] {aka CLN10, CPSD, HEL-S-130P}, CASC2 (cancer susceptibility 2) [NCBI Gene 255082] {aka C10orf5}, HLA-C (major histocompatibility complex, class I, C) [NCBI Gene 3107] {aka D6S204, HLA-JY3, HLAC, HLC-C, MHC, PSORS1}, FBXO32 (F-box protein 32) [NCBI Gene 114907] {aka Fbx32, MAFbx}, GCLM (glutamate-cysteine ligase modifier subunit) [NCBI Gene 2730] {aka GLCLR}, ULK1 (unc-51 like autophagy activating kinase 1) [NCBI Gene 8408] {aka ATG1, ATG1A, UNC51, Unc51.1, hATG1}, NQO1 (NAD(P)H quinone dehydrogenase 1) [NCBI Gene 1728] {aka DHQU, DIA4, DTD, NMOR1, NMORI, QR1}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, APP (amyloid beta precursor protein) [NCBI Gene 351] {aka AAA, ABETA, ABPP, AD1, APPI, CTFgamma}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, OPTN (optineurin) [NCBI Gene 10133] {aka ALS12, FIP2, GLC1E, HIP7, HYPL, NRP}, SRC (SRC proto-oncogene, non-receptor tyrosine kinase) [NCBI Gene 6714] {aka ASV, SRC1, THC6, c-SRC, p60-Src}, CPT1A (carnitine palmitoyltransferase 1A) [NCBI Gene 1374] {aka CPT I, CPT1, CPT1-L, CPTI-L, L-CPT1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, BAX (BCL2 associated X, apoptosis regulator) [NCBI Gene 581] {aka BCL2L4}, DNMT1 (DNA methyltransferase 1) [NCBI Gene 1786] {aka ADCADN, AIM, CXXC9, DNMT, HSN1E, MCMT}, MAPK14 (mitogen-activated protein kinase 14) [NCBI Gene 1432] {aka CSBP, CSBP1, CSBP2, CSPB1, EXIP, Mxi2}, TRIM16 (tripartite motif containing 16) [NCBI Gene 10626] {aka EBBP}, MAP3K14 (mitogen-activated protein kinase kinase kinase 14) [NCBI Gene 9020] {aka FTDCR1B, HS, HSNIK, IMD112, NIK}, SHH (sonic hedgehog signaling molecule) [NCBI Gene 6469] {aka HHG1, HLP3, HPE3, MCOPCB5, SMMCI, ShhNC}, LGALS8 (galectin 8) [NCBI Gene 3964] {aka Gal-8, PCTA-1, PCTA1, Po66-CBP}, IFNB1 (interferon beta 1) [NCBI Gene 3456] {aka IFB, IFF, IFN-beta, IFNB}, CCND1 (cyclin D1) [NCBI Gene 595] {aka BCL1, D11S287E, PRAD1, U21B31}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, IFI27 (interferon alpha inducible protein 27) [NCBI Gene 3429] {aka FAM14D, ISG12, ISG12A, P27}, SIX1 (SIX homeobox 1) [NCBI Gene 6495] {aka BOS3, DFNA23, TIP39}
- **Diseases:** NSCLC (MESH:D002289), cutaneous squamous cell carcinoma (MESH:D002294), systemic disease (MESH:D034721), cardiotoxicity (MESH:D066126), neuroblastoma (MESH:D009447), COPD (MESH:D029424), cerebral stroke (MESH:D020521), NASH (MESH:D005235), lung adenocarcinoma (MESH:D000077192), age-related macular degeneration (MESH:D008268), atrophy (MESH:D001284), ESCC (MESH:D000077277), chronic kidney disease (MESH:D051436), neurotoxic (MESH:D020258), lung carcinoma (MESH:D008175), AD (MESH:D000544), Cancer (MESH:D009369), diabetes (MESH:D003920), pancreatic cancer (MESH:D010190), Parkinson's disease (MESH:D010300), sarcopenia (MESH:D055948), periodontitis (MESH:D010518), inflammation (MESH:D007249), Neurodegenerative diseases (MESH:D019636), overload (MESH:D019190), pancreatic and hepatocellular carcinomas (MESH:C562463), glioma (MESH:D005910), melanoma (MESH:D008545), fibrosis (MESH:D005355), tissue injury (MESH:D017695), glioblastoma (MESH:D005909), HCC (MESH:D006528), ovarian cancer (MESH:D010051), cutaneous carcinoma (MESH:C562393), inflammatory cytokine (MESH:D000080424), breast cancer (MESH:D001943), heart failure (MESH:D006333), infarct (MESH:D007238), lymph node metastasis (MESH:D008207), SOP (MESH:D010024), Cardiovascular and cerebrovascular diseases (MESH:D002318), cardiomyocyte hypertrophy (MESH:D006984), tumorigenic (MESH:D002471), CRC (MESH:D015179), myocardial ischemia/reperfusion injury (MESH:D015427), metastasis (MESH:D009362)
- **Chemicals:** bevacizumab (MESH:D000068258), D-galactose (MESH:D005690), sorafenib (MESH:D000077157), iron (MESH:D007501), atezolizumab (MESH:C000594389), STZ (MESH:D013311), Withaferin A (MESH:C009684), vemurafenib (MESH:D000077484), Oridonin (MESH:C011959), MDA (MESH:D015104), glucose (MESH:D005947), ROS (MESH:D017382), indole-3-acetic acid (MESH:C030737), sanggenol L (MESH:C000608444), lipid (MESH:D008055), GSH (MESH:D005978), fatty acid (MESH:D005227), delphinidin (MESH:C017185), temozolomide (MESH:D000077204), Saikosaponin A (MESH:C025759), doxorubicin (MESH:D004317), RA (MESH:D014212), HFHC (-), cisplatin (MESH:D002945), H2O2 (MESH:D006861), lipofuscin (MESH:D008062)
- **Species:** human metapneumovirus (no rank) [taxon 162145], Mus musculus (house mouse, species) [taxon 10090], Porcine endogenous retrovirus (no rank) [taxon 61673], Human alphaherpesvirus 1 (Herpes simplex virus type 1, no rank) [taxon 10298], H5N1 subtype (serotype) [taxon 102793], Coregonus lavaretus (common whitefish, species) [taxon 59291], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** E121E
- **Cell lines:** NHDF — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_A3XU), Hep2 — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_1906), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), Vero — Chlorocebus sabaeus (Green monkey), Spontaneously immortalized cell line (CVCL_0059)

## Full text

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## Figures

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## References

67 references — full list in the complete paper: https://tomesphere.com/paper/PMC12913158/full.md

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Source: https://tomesphere.com/paper/PMC12913158