# Discovery of Spiro[chromane-2,4′-piperidine] Derivatives as Irreversible Inhibitors of SARS-CoV‑2 Papain-like Protease

**Authors:** Qiangqiang Wei, Ashley J. Taylor, Nagaraju Miriyala, Mahesh A. Barmade, Zachary O. Gentry, Jordan Anderson-Daniels, Kevin B. Teuscher, Mackenzie M. Crow, Chideraa Apakama, Taylor M. South, Tyson A. Rietz, Kangsa Amporndanai, Jason Phan, John L. Sensintaffar, Mark Denison, Taekyu Lee, Stephen W. Fesik

PMC · DOI: 10.1021/acs.jmedchem.5c03704 · Journal of Medicinal Chemistry · 2026-02-02

## TL;DR

Researchers discovered a new class of compounds that strongly inhibit a key enzyme in SARS-CoV-2, offering potential for antiviral treatments.

## Contribution

A novel class of spiro[chromane-2,4′-piperidine] derivatives was developed as irreversible inhibitors of SARS-CoV-2 PLPro.

## Key findings

- Lead compound 45 inhibited PLPro with an IC50 of 0.059 μM.
- Compound 45 showed antiviral activity in A549 cells with an EC50 of 2.1 μM.
- The inhibitors could help combat drug-resistant viral strains and future coronavirus outbreaks.

## Abstract

The papain-like protease (PLPro) plays a key
role in
SARS-CoV-2 replication and represents a promising target for the development
of new antiviral therapies. Previous efforts to develop fragment-derived
inhibitors of PLPro led to the identification of a novel
class of spiro­[chromane-2,4′-piperidin]-4-one inhibitors exemplified
by lead compound 7. High-resolution covalent cocrystal
structures and molecular dynamics simulations were utilized to guide
the development of a series of low-nanomolar irreversible PLPro inhibitors, with lead compound 45 demonstrating strong
enzymatic inhibition (IC50 = 0.059 μM at T = 60 min) and antiviral activity in A549 cells (EC50 = 2.1 μM at 48 hpi). This novel class of inhibitors
represents a promising avenue for the development of therapeutics
to overcome the potential of drug-resistant viral strains and future
coronavirus outbreaks.

## Linked entities

- **Chemicals:** compound 7 (PubChem CID 950368)
- **Diseases:** SARS-CoV-2 (MONDO:0100096)

## Full-text entities

- **Genes:** ORF1ab (ORF1a polyprotein;ORF1ab polyprotein) [NCBI Gene 43740578]
- **Chemicals:** Derivatives (-)
- **Species:** Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049], Gammacoronavirus (genus) [taxon 694013]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12910659/full.md

## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12910659/full.md

## References

29 references — full list in the complete paper: https://tomesphere.com/paper/PMC12910659/full.md

---
Source: https://tomesphere.com/paper/PMC12910659