# Identification and Verification of Anoikis‐related Genes in Epilepsy Through Bioinformatics Analysis

## TL;DR

This study identifies five genes linked to anoikis in epilepsy, offering new insights into its molecular causes and potential treatments.

## Contribution

The novel contribution is the identification of five anoikis-related genes as potential biomarkers and therapeutic targets for epilepsy.

## Key findings

- Five key anoikis-related genes (ANKRD13C, PIK3R1, BSG, CEACAM6, BRMS1) were identified as potential biomarkers for epilepsy.
- A risk score model based on these genes showed high diagnostic efficiency.
- MPEP, LY-341495, and MDL-28170 were suggested as potential therapeutic agents.

## Abstract

Epilepsy is a significant neurological disorder characterized by a complex etiology. Understanding the molecular mechanisms, notably those implicated in the immune system and anoikis, is crucial for developing targeted therapies against epilepsy.

First, two epilepsy‐related transcriptomic datasets (GSE143272 and GSE4290) were selected from the GEO database; then, the differentially expressed genes (DEGs) were identified. Focusing on anoikis in epilepsy, we screened out anoikis‐related genes (ARGs). Bioinformatics analysis and machine learning were employed for comprehensive analysis, and the research results were validated in an epileptic mouse model.

A total of 3525 DEGs from the GSE143272 and GSE4290 datasets were identified, and a total of 24 ARGs were obtained. The five key differentially expressed ARGs (DE‐ARGs) were screened through machine learning analysis, including ANKRD13C, PIK3R1, BSG, CEACAM6, and BRMS1; these DE‐ARGs emerged as potential biomarkers for epilepsy and were involved in various signaling pathways and immune cell activities, and results were further experimentally validated. Besides, the risk score model based on the DE‐ARGs demonstrated high diagnostic efficiency; moreover, connectivity map database analysis suggested MPEP, LY‐341495, and MDL‐28170 as potential therapeutic agents.

This study identified the five ARGs as potential therapeutic targets, highlighting the role of anoikis in epilepsy pathogenesis. Our result provides a novel insight into the molecular landscape of epilepsy and paves the way for further exploration and the development of more effective treatment strategies.

A total of 3525 differentially expressed genes (DEGs) from two epilepsy‐related transcriptomic datasets (GSE143272 and GSE4290) were screened, and a further 24 anoikis‐related genes (ARGs) were obtained. The five key differentially expressed ARGs (DE‐ARGs), including ANKRD13C, PIK3R1, BSG, CEACAM6, and BRMS1, were identified through machine learning (LASSO regression and WGCNA analysis).