# Single–gene knockout of RNLS or HIVEP2 are insufficient to protect β–cell spheroids from allo– and xeno–rejection

**Authors:** Ismail Can Karaoglu, Arda Odabas, Tamer Önder, Seda Kizilel

PMC · DOI: 10.3389/fimmu.2026.1759835 · 2026-02-03

## TL;DR

Deleting RNLS or HIVEP2 genes in beta cells does not protect them from rejection in mice, suggesting more complex solutions are needed for successful cell therapy in diabetes.

## Contribution

Demonstrates that single-gene knockout of RNLS or HIVEP2 is insufficient for immune protection in beta-cell grafts.

## Key findings

- RNLS and HIVEP2 deletions did not prevent allogeneic or xenogeneic rejection in immunocompetent mice.
- Allogeneic grafts survived longer than xenogeneic ones, but both were eventually rejected regardless of gene edits.
- Functional impairment was only observed in Rnls-deleted murine beta cells.

## Abstract

β-Cell replacement therapy offers a potential cure for type 1 diabetes, but its success is limited by rapid graft rejection. While genome-wide CRISPR screens have recently identified RNLS and HIVEP2 as candidate genes capable of protecting β-cells from autoimmune destruction, their efficacy against the distinct mechanisms of allogeneic and xenogeneic rejection remains unknown. This study aimed to test the hypothesis that single-gene ablation of RNLS or HIVEP2 protects β-cell spheroids from allo- and xenorejection in immunocompetent hosts.

Murine β-TC-6 and human EndoC-βH1 β-cell lines were genetically edited using CRISPR-Cas9 to knockout RNLS or HIVEP2. Editing efficiencies were confirmed via T7 endonuclease I assay and Tracking of Indels by Decomposition (TIDE) analysis. Cells were aggregated into uniform, size-controlled spheroids using an optimized agarose suspension culture. Functional integrity was assessed via glucose-stimulated insulin secretion (GSIS). To evaluate immune evasion in vivo, luciferase-labeled spheroids were transplanted subcutaneously into immunocompetent CD-1 mice, modelling allogeneic (murine-to-murine) and xenogeneic (human-to-murine) rejection, with graft survival monitored longitudinally by bioluminescence imaging.

Robust editing efficiencies were achieved for both targets. Functional characterization indicated that Rnls deletion modestly impaired GSIS in murine cells, whereas HIVEP2 deletion showed no functional alterations in either cell line. In vivo assessment revealed no protective effects of RNLS or HIVEP2 deletion; grafts from both knockout groups displayed rejection kinetics indistinguishable from non-targeting controls. While allogeneic grafts survived longer than xenogeneic grafts, both were ultimately cleared by the host immune system regardless of genotype.

These data indicate that single-gene deletions of RNLS or HIVEP2 are insufficient to protect β-cell grafts from the barriers of allo- or xenorejection. By defining the limitations of these targets in isolation, our findings highlight the necessity for combinatorial genome editing strategies or complementary integration with immunomodulatory biomaterials to achieve effective and sustained β-cell graft survival.

## Linked entities

- **Genes:** RNLS (renalase, FAD dependent amine oxidase) [NCBI Gene 55328], HIVEP2 (HIVEP zinc finger 2) [NCBI Gene 3097]
- **Diseases:** type 1 diabetes (MONDO:0005147)
- **Species:** Mus musculus (taxon 10090), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** Cd47 (CD47 antigen (Rh-related antigen, integrin-associated signal transducer)) [NCBI Gene 16423] {aka 9130415E20Rik, B430305P08Rik, IAP, Itgp}, Cd274 (CD274 antigen) [NCBI Gene 60533] {aka A530045L16Rik, B7h1, Pdcd1l1, Pdcd1lg1, Pdl1}, Rnls (renalase, FAD-dependent amine oxidase) [NCBI Gene 67795] {aka 6530404N21Rik, C10orf59}, ALB (albumin) [NCBI Gene 213] {aka FDAHT, HSA, PRO0883, PRO0903, PRO1341}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Krt19 (keratin 19) [NCBI Gene 16669] {aka CK-19, EndoC, K19, Krt-1.19, Krt1-19}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, RNLS (renalase, FAD dependent amine oxidase) [NCBI Gene 55328] {aka C10orf59, RENALASE}, Ubc (ubiquitin C) [NCBI Gene 22190] {aka 2700054O04Rik, Rps27a, TI-225, Uba52, Ubb}, Hbb-bh1 (hemoglobin Z, beta-like embryonic chain) [NCBI Gene 15132] {aka betaH1}, Hivep2 (human immunodeficiency virus type I enhancer binding protein 2) [NCBI Gene 15273] {aka Gm20114, MIBP-1, MIBP1, Schnurri-2, Shn-2}, CD1C (CD1c molecule) [NCBI Gene 911] {aka BDCA1, CD1, R7}, Cd1 (CD1 antigen complex) [NCBI Gene 111334], HIVEP2 (HIVEP zinc finger 2) [NCBI Gene 3097] {aka HIV-EP2, MBP-2, MIBP1, MRD43, SHN2, ZAS2}
- **Diseases:** immunodeficient (MESH:D007153), Virus infection (MESH:D014777), nerve damage (MESH:D000080902), hypoglycemia (MESH:D007003), heart disease (MESH:D006331), T1D (MESH:D003922), T and B cell deficient (MESH:D016393), SCID (MESH:D016511), autoimmune destruction (MESH:D008105), dislocation (MESH:D004204), necrosis (MESH:D009336), inflammatory (MESH:D007249), kidney failure (MESH:D051437), Cancer (MESH:D009369), TIDE (MESH:C000721391), stroke (MESH:D020521), NOD (MESH:D009765), autoimmune (MESH:D001327), non- (MESH:C580335)
- **Chemicals:** G418 (MESH:C010680), HG (MESH:D008628), HEPES (MESH:D006531), penicillin (MESH:D010406), puromycin (MESH:D011691), Propidium iodide (MESH:D011419), NaHCO3 (MESH:D017693), D-Glucose KRB (-), bicarbonate (MESH:D001639), fatty-acid (MESH:D005227), Alexa Fluor 488 (MESH:C000711379), MgSO4 (MESH:D008278), PFA (MESH:C003043), agarose (MESH:D012685), CO2 (MESH:D002245), magnesium (MESH:D008274), DAPI (MESH:C007293), Glucose (MESH:D005947), Neomycin (MESH:D009355), calcium (MESH:D002118), PBS (MESH:D007854), Texas Red (MESH:C034657), KCl (MESH:D011189), PI (MESH:D010716), fluorescein diacetate (MESH:C018506), oxygen (MESH:D010100), MgCl2 (MESH:D015636), NaCl (MESH:D012965), Triton X-100 (MESH:D017830), D-luciferin (MESH:C532924), streptomycin (MESH:D013307), FITC (MESH:D016650), PEG (MESH:D011092), EDTA (MESH:D004492), isoflurane (MESH:D007530), hygromycin B (MESH:D006921), CaCl2 (MESH:D002122)
- **Species:** Homo sapiens (human, species) [taxon 9606], Cavia porcellus (domestic guinea pig, species) [taxon 10141], Lentivirus (genus) [taxon 11646], Mus musculus (house mouse, species) [taxon 10090], Mycoplasma (genus) [taxon 2093]
- **Cell lines:** EndoC-betaH1 — Homo sapiens (Human), Transformed cell line (CVCL_L909), beta-TC-6 — Mus musculus (Mouse), Mouse insulinoma, Transformed cell line (CVCL_0605), CRL- — Sigmodon hispidus (Hispid cotton rat), Spontaneously immortalized cell line (CVCL_YD58), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063)

## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12909247/full.md

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Source: https://tomesphere.com/paper/PMC12909247