# DOT1L provides transcriptional memory through PRC1.1 antagonism

**Authors:** Daniel Neville, Daniel T. Ferguson, Emily B. Heikamp, Zhihao Lai, Graham W. Magor, Charlene Lam, Olivia G. Dobbs, Vita Levina, Kathy Knezevic, James J. The, Shania Alex, Stephen C. Suits, Bradon Rumler, Michael Uckelmann, Laure Talarmain, Enid Y. N. Lam, Andrew C. Perkins, Scott A. Armstrong, Charles C. Bell, Chen Davidovich, Omer Gilan

PMC · DOI: 10.1038/s41556-025-01859-8 · Nature Cell Biology · 2026-02-03

## TL;DR

DOT1L helps maintain gene memory in leukemia by counteracting PRC1.1, which is important for the effectiveness of cancer treatments.

## Contribution

The study reveals DOT1L's role in transcriptional memory through biochemical antagonism with PRC1.1 in leukemia.

## Key findings

- Menin inhibition leads to PRC1.1-dependent gene silencing of MLL-FP targets.
- DOT1L inhibition increases H2AK119ub across the genome.
- DOT1L and PRC1.1 antagonism is conserved across cell types.

## Abstract

DOT1L and Menin are essential cofactors for the oncogenic activity of MLL fusion proteins (MLL-FPs) in leukaemia. However, the mechanisms underpinning the therapeutic effects of their inhibitors remain unclear. Here we identify a critical role for the non-canonical Polycomb repressive complex 1.1 (PRC1.1) in mediating the cellular responses to DOT1L and Menin inhibitors. Menin inhibition induces PRC1.1-dependent deposition of H2AK119ub to silence a subset of MLL-FP targets, whereas DOT1L inhibition results in a genome-wide increase in H2AK119ub. We show that enhanced PRC1.1 activity arises specifically from the progressive loss of DOT1L-mediated H3K79 methylation, independent of MLL-FP displacement or transcriptional repression. This regulatory crosstalk is conserved across cell types and is driven by direct biochemical antagonism between H3K79 methylation and PRC1 activity. Together, our findings establish DOT1L as a component of transcriptional memory co-opted in leukaemia and suggest it serves as the missing link balancing the opposing forces of the MLL–Polycomb axis.

Neville, Ferguson et al. show that non-canonical Polycomb repressive complex 1.1-mediated gene silencing is antagonized by DOT1L and is required for the therapeutic efficacy of Menin and DOT1L inhibitors in mixed-lineage leukaemia.

## Linked entities

- **Genes:** DOT1L (DOT1 like histone lysine methyltransferase) [NCBI Gene 84444], Men1 (menin 1) [NCBI Gene 29417]
- **Proteins:** PRC1_1 (carboxypeptidase C prc1)
- **Diseases:** leukaemia (MONDO:0004355)

## Full-text entities

- **Genes:** PRC1 (protein regulator of cytokinesis 1) [NCBI Gene 9055] {aka ASE1, MAP65}, DOT1L (DOT1 like histone lysine methyltransferase) [NCBI Gene 84444] {aka DOT1, KMT4, NDNS}, MEN1 (menin 1) [NCBI Gene 4221] {aka MEAI, SCG2}, KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297] {aka ALL-1, ALL1, CXXC7, GAS7, HRX, HTRX}
- **Diseases:** leukaemia (MESH:D015458)

## Full text

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## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12904788/full.md

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Source: https://tomesphere.com/paper/PMC12904788