# CRISPR/Cas9-Mediated Editing in FAD2 Gene to Enhance Oil Quality in Soybean [Glycine max (L.) Merrill]

**Authors:** Balaji U. Rathod, Riddhi Rajyaguru, Ramesh N. Dhawale, Rukam S. Tomar, Shasikant Sharma, Manohar G. Chaskar, Omar Awad Alsaidan, Sunil Tulshiram Hajare, Mojtaba Kordrostami, Mojtaba Kordrostami, Mojtaba Kordrostami

PMC · DOI: 10.1371/journal.pone.0342660 · PLOS One · 2026-02-13

## TL;DR

Scientists used CRISPR/Cas9 to edit the FAD2 gene in an Indian soybean variety, increasing healthy oil content and improving oil quality.

## Contribution

This is the first study demonstrating CRISPR/Cas9 editing of the FAD2 gene in an Indian soybean cultivar to improve oil quality.

## Key findings

- Three edited soybean lines showed increased oleic acid (42–45%) and decreased linoleic acid (30–32%) compared to wild type.
- PCR analysis confirmed transgene-free edited plants with no Cas9 or U3 sequences.
- Editing improved the oleic/linoleic acid ratio by nearly two-fold, enhancing oil stability and processing efficiency.

## Abstract

Conventional soybean oil contains high levels of linoleic acid, which reduces oxidative stability and necessitates hydrogenation, leading to trans-fat formation. In this study, 40 Indian soybean genotypes were screened for fatty acid composition, and Gujarat Junagadh Soybean-3 (GJS-3) was selected for CRISPR/Cas9-mediated editing of the fatty acid desaturase-2 (FAD2) gene. Agrobacterium-mediated transformation produced 22 regenerated plants, of which 57.1% were PCR-positive for Cas9/sgRNA. Targeted single-nucleotide substitutions were confirmed by Sanger sequencing in three edited lines (T3, T7, and T15), corresponding to an editing efficiency of 13.63%. These lines exhibited a marked increase in oleic acid content (42–45%) compared with the wild type (22%) and a concomitant reduction in linoleic acid (30–32% vs. 54%), resulting in nearly a two-fold improvement in the oleic/linoleic acid ratio. PCR analysis confirmed the absence of Cas9 and U3 sequences, indicating transgene-free edited plants. This study provides the first evidence of CRISPR/Cas9-mediated FAD2 editing in an Indian soybean cultivar and demonstrates its effectiveness in improving oil quality, oxidative stability, and processing efficiency.

## Linked entities

- **Genes:** FANCD2 (FA complementation group D2) [NCBI Gene 2177]

## Full-text entities

- **Genes:** FAD2-1B (omega-6 fatty acid desaturase) [NCBI Gene 100805777] {aka FAD2, FAD2-1, FAD2.6, GMFAD2-1B}
- **Chemicals:** oleic (-), linoleic acid (MESH:D019787), fatty acid (MESH:D005227), Oil (MESH:D009821), trans-fat (MESH:D044242), oleic acid (MESH:D019301)
- **Species:** Glycine max (soybean, species) [taxon 3847]

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12904588/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12904588/full.md

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Source: https://tomesphere.com/paper/PMC12904588