# From knowledge landscapes to network mechanisms: charting regulated cell death pathways in ALS

**Authors:** Jingxuan Zhang, Zilin Zhao, Tianyue Xiang, Da Teng, Hejia Wan, Qiong Zhang, Xiaohui Liu

PMC · DOI: 10.3389/fnagi.2026.1742805 · Frontiers in Aging Neuroscience · 2026-01-30

## TL;DR

This paper maps the research on how cell death pathways are linked to ALS, identifying key genes and mechanisms for potential treatment targets.

## Contribution

The study integrates bibliometric trends with bioinformatics to reveal convergent mechanisms in ALS-related cell death pathways.

## Key findings

- Publications on ALS and cell death have increased significantly since 2015 with growing global collaboration.
- Key hub genes like TP53 and AKT1 are central to RCD pathways in ALS, suggesting potential therapeutic targets.
- Ferroptosis, inflammation, and autophagy are interconnected in ALS, pointing to immunometabolic convergence.

## Abstract

To map the research landscape linking amyotrophic lateral sclerosis (ALS) with regulated cell death (RCD) and to integrate bibliometric trends with bioinformatics evidence to identify convergent mechanisms and actionable targets.

Web of Science Core Collection, PubMed, and Scopus were searched for 2005–2024 (English; Article/Review). After merging and de-duplication, 6,272 records were analyzed using CiteSpace, VOSviewer, and bibliometrix to evaluate publication trends, collaboration, co-citation structure, and keyword evolution. In parallel, ALS-related genes were intersected with apoptosis-, ferroptosis-, and pyroptosis-associated gene sets. Shared targets were used to construct PPI networks, identify core modules and hub genes, and perform GO/KEGG enrichment analyses.

Publications and citations increased steadily with a clear rise after 2015. The field is anchored by the USA and shows rapidly growing contributions from Asia and Europe. Keyword evolution indicates a shift from “oxidative stress/apoptosis” toward multi-pathway RCD, with prominent recent bursts in ferroptosis, pyroptosis, necroptosis, and autophagy/mitophagy, alongside persistent themes in motor-neuron degeneration, mitochondria, and neuro-inflammation. Bio-informatics results showed substantial genetic overlap between ALS and RCD modalities. Hub-gene analysis highlighted TP53, AKT1, STAT3, MYC, RELA, EP300, CREBBP, JUN, HSP90AA1, and MAPK3 as central nodes. Enrichment analyses implicated FoxO, HIF-1, and lipid-related pathways, and GO terms related to chemical/oxidative stress responses and autophagy regulation.

ALS–cell death research is consolidating around interconnected RCD programs. Integrated bibliometric and bioinformatics evidence supports an immunometabolic convergence involving ferroptosis–inflammation–autophagy signaling, providing a focused set of candidate pathways and hub targets for mechanistic validation and translation.

## Linked entities

- **Genes:** TP53 (tumor protein p53) [NCBI Gene 7157], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774], MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609], RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970], EP300 (EP300 lysine acetyltransferase) [NCBI Gene 2033], CREBBP (CREB binding lysine acetyltransferase) [NCBI Gene 1387], JUN (Jun proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 3725], HSP90AA1 (heat shock protein 90 alpha family class A member 1) [NCBI Gene 3320], MAPK3 (mitogen-activated protein kinase 3) [NCBI Gene 5595]
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976), ALS (MONDO:0004976)

## Full-text entities

- **Genes:** CREBBP (CREB binding lysine acetyltransferase) [NCBI Gene 1387] {aka CBP, KAT3A, MKHK1, RSTS, RSTS1}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}, JUN (Jun proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 3725] {aka AP-1, AP1, c-Jun, cJUN, p39}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, EP300 (EP300 lysine acetyltransferase) [NCBI Gene 2033] {aka KAT3B, MKHK2, RSTS2, p300}, RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970] {aka AIF3BL3, CMCU, NFKB3, p65}, MAPK3 (mitogen-activated protein kinase 3) [NCBI Gene 5595] {aka ERK-1, ERK1, ERT2, HS44KDAP, HUMKER1A, P44ERK1}, HSP90AA1 (heat shock protein 90 alpha family class A member 1) [NCBI Gene 3320] {aka EL52, HEL-S-65p, HSP86, HSP89A, HSP90A, HSP90N}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}
- **Diseases:** inflammation (MESH:D007249), ALS (MESH:D000690), motor-neuron degeneration (MESH:D009410)
- **Chemicals:** lipid (MESH:D008055)

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12901334/full.md

## References

89 references — full list in the complete paper: https://tomesphere.com/paper/PMC12901334/full.md

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Source: https://tomesphere.com/paper/PMC12901334