# Poster Session I- A42 ANTIBIOTICS AND C. DIFFICILE INFECTION DIFFERENTIALLY REGULATE MOUSE INTESTINAL TUFT CELL POPULATIONS

**Authors:** N Al-Emadi, T Steiner

PMC · DOI: 10.1093/jcag/gwaf042.042 · Journal of the Canadian Association of Gastroenterology · 2026-02-13

## TL;DR

This study shows that antibiotics and Clostridioides difficile infection affect tuft cells in the mouse intestine differently depending on the gut region.

## Contribution

The study reveals region-specific regulation of tuft cell populations by antibiotics and C. difficile infection in mice.

## Key findings

- CDI caused significant tuft cell depletion in the large intestine regions.
- Antibiotics alone reduced tuft cells in the cecum and distal colon but increased them in the ileum.
- CDI reversed antibiotic-induced ileal tuft cell expansion.

## Abstract

Type 2 immune responses play a protective role in mitigating the severity of Clostridioides difficile infection (CDI). Specifically, the alarmin cytokine IL-25 has been shown to be protective in murine models. In the intestinal epithelium, IL-25 is primarily produced by tuft cells, specialized chemosensory epithelial cells. Despite the protective role of their key effector cytokine, the dynamics of the tuft cell population during antibiotic-induced dysbiosis and subsequent CDI are poorly characterized.

This study tested our hypothesis that intestinal tuft cells are depleted following antibiotic treatment and subsequent CDI and aimed to characterize these dynamic changes across different regions of the murine gut.

C57BL/6 mice (sex-matched, 9-12 weeks) were pre-treated for three days with an antibiotic cocktail dissolved in gel food, followed by intraperitoneal clindamycin injection. Mice were subsequently challenged via oral gavage with 105 CFU of C. difficile (VPI 10463) spores. Control groups included untreated mice and antibiotic-treated mice without infection. At day 3 post-infection, distal ileum, cecum, proximal colon, and distal colon tissues were collected and stained for DCLK1 via immunofluorescence. Tuft cell counts were quantified per mm2 of intestinal tissue.

Antibiotic treatment and subsequent CDI resulted in distinct, region-specific alterations to intestinal tuft cell populations. In the large intestines, CDI challenge led to a significant reduction in tuft cell density across all tested regions (cecum, proximal colon, distal colon) compared to untreated controls. Antibiotic treatment alone also significantly reduced tuft cell numbers in the cecum and distal colon. In contrast, antibiotic treatment induced a significant tuft cell expansion in the ileum, which was abrogated upon CDI challenge.

Our results reveal that intestinal tuft cell populations are dynamically and differentially regulated by antibiotic treatment and subsequent CDI, leading to a pronounced depletion through the large intestine during infection. The decline of a key immunomodulatory cell type may worsen CDI by impairing type 2 immune responses. Further studies are underway to explore the functional consequences of these cellular changes.

Supported by unrestricted research funds

## Linked entities

- **Proteins:** IL25 (interleukin 25), DCLK1 (doublecortin like kinase 1)
- **Chemicals:** clindamycin (PubChem CID 446598)
- **Diseases:** CDI (MONDO:0015790)

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Source: https://tomesphere.com/paper/PMC12900825