# Childhood brain tumors instruct cranial hematopoiesis and immunotolerance

**Authors:** Elizabeth Cooper, David A. Posner, Colin Y. C. Lee, Linda Hu, Sigourney Bonner, Jessica T. Taylor, Oscar Baldwin, Rocio Jimenez-Guerrero, Katherine E. Masih, Katherine Wickham Rahrmann, Jason Eigenbrood, Gina Ngo, Valar Nila Roamio Franklin, Clive S. D’Santos, Richard Mair, Thomas Santarius, Claudia Craven, Ibrahim Jalloh, Julia Moreno Vicente, Timotheus Y. F. Halim, Li Wang, Arnold R. Kreigstien, Brandon Wainwright, Fredrik J. Swartling, Javed Khan, Menna R. Clatworthy, Richard J. Gilbertson

PMC · DOI: 10.1038/s41588-025-02499-2 · Nature Genetics · 2026-02-03

## TL;DR

Childhood brain tumors interact with skull bone marrow to suppress immune responses, and targeting this interaction can shrink tumors.

## Contribution

The study reveals a novel immune circuit between brain tumors and hematopoietic stem cells in the skull bone marrow.

## Key findings

- Antigen presentation by hematopoietic stem cells promotes myelopoiesis and regulatory T cells, leading to tumor immunotolerance.
- Normalizing hematopoiesis with anti-cytokine antibodies caused significant tumor regression in mouse models of aggressive childhood brain tumors.

## Abstract

Recent research has challenged a long-held view of the brain as an immune-privileged organ, revealing active immunosurveillance with therapeutic relevance. Using a new genetically engineered mouse model of ZFTA–RELA ependymoma, a childhood brain tumor, we characterized an immune circuit between the tumor and antigen-presenting hematopoietic stem and progenitor cells (HSPCs) in the skull bone marrow. The presentation of antigens by HSPCs to CD4+ T cells biased HSPC lineages toward myelopoiesis and polarized CD4+ T cells to regulatory T cells, culminating in tumor immunotolerance. Remarkably, normalizing hematopoiesis with a single infusion of antibodies directed against cytokines enriched in the cerebrospinal fluid of mice bearing ZFTA–RELA ependymomas, choroid plexus carcinomas or group 3 medulloblastoma—all aggressive childhood brain tumors—disrupted this process and caused profound tumor regression. These findings demonstrate the existence of a skull bone marrow–tumor immunological interface and suggest that modulating the local supply of myeloid cells could represent a less toxic therapeutic strategy for aggressive childhood brain tumors.

Antigen presentation in skull bone marrow by hematopoietic stem and progenitor cells induces myelopoiesis and generates CD4+ regulatory T cells in a mouse model of ependymoma, promoting immune tolerance. Treatment with anti-GM-CSF antibody has antitumor effects that are augmented by immunotherapy.

## Linked entities

- **Genes:** ZFTA (zinc finger translocation associated) [NCBI Gene 65998], RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970]
- **Proteins:** CSF2 (colony stimulating factor 2)
- **Diseases:** ependymoma (MONDO:0003478), choroid plexus carcinoma (MONDO:0016718)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Cd4 (CD4 antigen) [NCBI Gene 12504] {aka L3T4, Ly-4}
- **Diseases:** brain tumor (MESH:D001932), medulloblastoma (MESH:D008527), choroid plexus carcinomas (MESH:D020288), tumor (MESH:D009369), ependymoma (MESH:D004806)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12900635/full.md

## References

5 references — full list in the complete paper: https://tomesphere.com/paper/PMC12900635/full.md

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Source: https://tomesphere.com/paper/PMC12900635