# Development of a Deep Learning Model to Automatically Identify Palatal Landmarks on Three‐Dimensional Maxillary Dental Casts

**Authors:** Jamal Giri, George Vadakepurathan Jose, Nikhil Cherian Kurian, Alan Brook, Lyle Palmer, Toby Hughes

PMC · DOI: 10.1155/ijod/9409391 · International Journal of Dentistry · 2026-02-12

## TL;DR

This paper presents a deep learning model that automatically identifies 12 palatal landmarks on 3D dental casts with high accuracy, reducing the need for manual annotation.

## Contribution

A two-stage PointNet++ model for precise and efficient automatic detection of palatal landmarks on 3D dental casts.

## Key findings

- The model achieved a mean detection error of 0.55 mm across 12 palatal landmarks.
- 90% of landmarks were predicted within 1 mm and 98% within 2 mm of the ground truth.
- The model significantly reduces manual annotation time in clinical and research settings.

## Abstract

To develop a deep learning model to automatically identify palatal landmarks on three‐dimensional (3D) digital maxillary dental casts, and to evaluate model performance.

Twelve palatal landmarks were manually annotated on each 3D digital maxillary dental cast from 377 individuals in the permanent dentition stage. Manually annotated landmarks were used as ground truth to develop and to evaluate a deep learning model for automatic landmark detection. A two‐stage PointNet++ architecture was employed, where coarse landmark predictions were first generated, followed by localized refinement for improved precision. The model accuracy was evaluated by measuring the linear discrepancy between the final predicted and the ground‐truth landmark positions.

A PointNet++‐based hierarchical deep learning model, designed to extract both local and global features from point clouds, was developed. The model demonstrated a mean landmark detection error of 0.55 mm (SD ± 0.49) between predicted and ground‐truth positions across 12 landmarks. The model also exhibited high predictive performance, correctly predicting 90% of landmarks within 1 mm and 98% within 2 mm of the ground truth.

A deep learning model was developed for automated identification of 12 palatal landmarks on 3D maxillary dental casts, which demonstrated high performance. Our model will enable more efficient morphological assessment of the palate by substantially reducing the time for manual annotation in clinical and research settings.

## Full-text entities

- **Genes:** PKLR (pyruvate kinase L/R) [NCBI Gene 5313] {aka CNSHA2, PK1, PKL, PKRL, RPK}
- **Diseases:** cleft palate (MESH:D002972), craniofacial anomalies (MESH:D019465), crowding (MESH:D008310), inflammation (MESH:D007249), fatigue (MESH:D005221)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

33 references — full list in the complete paper: https://tomesphere.com/paper/PMC12900578/full.md

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Source: https://tomesphere.com/paper/PMC12900578