# Structural and Biochemical Characterization of an Atypical α-Carbonic Anhydrase from the Tardigrade Ramazzottius varieornatus

**Authors:** Byung Hoon Jo

PMC · DOI: 10.3390/molecules31030538 · Molecules · 2026-02-03

## TL;DR

This study explores a unique carbonic anhydrase from a resilient tardigrade species, revealing its structural features and potential role in DNA binding and redox sensing.

## Contribution

The study identifies and characterizes RvCA5, an atypical α-carbonic anhydrase with DNA-binding and redox-sensing properties in tardigrades.

## Key findings

- RvCA5 has extended disordered regions and lacks typical CO2 hydration activity.
- RvCA5 contains reactive cysteine residues and can bind DNA, as shown by mobility shift assays.
- The N-terminal IDR acts as a barrier to substrate diffusion, and the protein may regulate transcription.

## Abstract

The tardigrade Ramazzottius varieornatus exhibits extraordinary resilience to extreme environmental stresses, yet the functional diversity of its proteome remains largely unexplored. In this study, the structural and biochemical characterization of RvCA5, an atypical α-carbonic anhydrase (CA) identified in R. varieornatus, is presented. Expression analysis in E. coli revealed the spontaneous formation of a truncated RvCA5 species, which was confirmed to be unrelated to signal peptide cleavage. RvCA5 exhibited distinct structural features, including extended intrinsically disordered regions (IDRs) at both termini. Unlike canonical α-CAs, RvCA5 exhibited negligible CO2 hydration activity, which was partially enhanced by the removal of the N-terminal IDR, suggesting that this region acts as a dynamic entropic barrier hindering substrate diffusion. RvCA5 possesses multiple surface-exposed reactive cysteine residues, resembling the redox-sensing human CA 3. Notably, consistent with a predicted nuclear localization signal, in silico modeling predicted that RvCA5 can bind DNA via a positively charged patch near the C-terminal IDR. The DNA-binding capability of RvCA5 was experimentally demonstrated by electrophoretic mobility shift assays. Collectively, these findings suggest that RvCA5 potentially functions as a redox-responsive transcriptional regulator.

## Linked entities

- **Species:** Ramazzottius varieornatus (taxon 947166), Escherichia coli (taxon 562)

## Full-text entities

- **Chemicals:** CO2 (MESH:D002245), cysteine (MESH:D003545), alpha-CAs (-)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Ramazzottius varieornatus (species) [taxon 947166], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12899995/full.md

## References

47 references — full list in the complete paper: https://tomesphere.com/paper/PMC12899995/full.md

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Source: https://tomesphere.com/paper/PMC12899995