# Bio-Organic Fertilizer with Bacillus velezensis Promoted Plant Growth by Regulating Soil Microbial Community Structure and C/N Cycle Function

**Authors:** Haiyun Zhang, Cuixue Cui, Shuangxi Li, Weiguang Lv, Juanqin Zhang, Xianpu Zhu, Chenglong Xu, Qun Wang, Naling Bai, Hanlin Zhang

PMC · DOI: 10.3390/plants15030382 · Plants · 2026-01-26

## TL;DR

A bio-organic fertilizer with Bacillus velezensis improved soil health and plant growth by enhancing microbial communities and carbon/nitrogen cycles.

## Contribution

The study demonstrates how bio-organic fertilizer regulates soil microbial structure and C/N cycle function to promote plant growth.

## Key findings

- BF increased soil nutrients and enzyme activities compared to chemical fertilizer.
- BF enriched beneficial bacteria and reduced harmful fungi in the soil.
- BF improved carbon and nitrogen cycle synergy and plant yield.

## Abstract

This study investigated the effects of bio-organic fertilizer (BF) containing plant growth-promoting bacterium Bacillus velezensis SS-20 on soil properties, microbial community structure, and C/N cycle functional genes. The results showed that compared with chemical fertilizer (CF) and deactivated bio-organic fertilizer (BFD) treatments, BF significantly improved soil physicochemical properties. Soil pH, organic matter, total nitrogen, total potassium, and total phosphorus content under BF treatment were increased by 14.8%, 56.5%, 48.2%, 38.8%, and 58.4%, respectively, compared to the control; soil urease and sucrase activities increased by 3.5 and 2.4 times those of CF treatment, respectively. Meanwhile, BF increased pakchoi yield by 11.2% (vs. CF). BF treatment enhanced the relative abundance of beneficial bacteria Actinomycetota by 28.4% compared with the BFD treatment and raised that of fungi Ascomycota to 1.9 times that of the control. At the genus level, BF significantly enriched biocontrol-relevant genus Pseudogymnoascus, whose abundance reached three times that of CF treatment, while the abundance of potentially harmful genus Penicillium decreased by 82%. BF also led to a high degree of synergy in carbon and nitrogen cycles. Functional gene analysis indicated that BF down-regulated multiple carbon-degrading genes, increased organic nitrogen metabolism genes by 5.3%, and reduced denitrification genes by 13.3%. Overall, bio-organic fertilizer optimized the soil microenvironment, regulated the microbial community structure, and improved C/N use efficiency and plant growth by introducing functional microorganisms and organic matter.

## Linked entities

- **Species:** Bacillus velezensis (taxon 492670), Actinomycetota (taxon 201174), Ascomycota (taxon 4890), Pseudogymnoascus (taxon 78156), Penicillium (taxon 5073)

## Full-text entities

- **Chemicals:** phosphorus (MESH:D010758), BFD (-), N (MESH:D009584), potassium (MESH:D011188), C (MESH:D002244)
- **Species:** Pseudogymnoascus (genus) [taxon 78156], Ascomycota (ascomycete fungi, phylum) [taxon 4890], Penicillium (genus) [taxon 5073]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12899839/full.md

## References

51 references — full list in the complete paper: https://tomesphere.com/paper/PMC12899839/full.md

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Source: https://tomesphere.com/paper/PMC12899839