# Integrative Metabolomic and Physiological Responses of Citrus sinensis to Soil Management in a Semi-Arid Orchard

**Authors:** Carlos Giménez-Valero, Dámaris Núñez-Gómez, Pilar Legua, Juan José Martínez-Nicolás, Vicente Lidón, Pablo Melgarejo

PMC · DOI: 10.3390/plants15030386 · Plants · 2026-01-27

## TL;DR

This study explores how soil management affects the metabolism and growth of citrus trees in semi-arid regions.

## Contribution

The study reveals how specific soil treatments influence citrus fruit metabolism and water-use efficiency in water-limited environments.

## Key findings

- Soil treatments with netting and zeolite altered carbon and nitrogen metabolism in citrus trees.
- Treatments affected levels of sugars, organic acids, and amino acids, indicating improved water-use efficiency.
- Metabolomic profiling showed distinct metabolic fingerprints linked to different soil management practices.

## Abstract

The coordination between carbon and nitrogen metabolism is central to plant adaptation to water-limited environments. This study investigated how soil management practices modulate the metabolic and physiological performance of Citrus sinensis trees cultivated under semi-arid conditions. Six field treatments combining weed-control netting, subsurface drainage, and zeolite amendment were evaluated for their effects on vegetative growth, yield, and fruit metabolome. Using 1H-NMR spectroscopy, 23 metabolites in peel and 21 in juice were identified and quantified, revealing that sugars, organic acids, and amino acids were the most responsive compound classes. Multivariate analyses (PCA, PLS-DA) showed distinct metabolic fingerprints associated with each soil management regime. Treatments integrating netting and zeolite (T4) induced a coordinated reprogramming of carbon and nitrogen metabolism, characterized by altered levels of glucose, fructose, citrate, and proline. These changes suggest enhanced osmotic regulation and tricarboxylic acid cycle activity, supporting improved water-use efficiency and physiological stability under semi-arid stress. The results demonstrate that soil management directly influences fruit metabolic homeostasis, linking environmental modulation of root-zone conditions with whole-plant biochemical adjustment. This integrative metabolomic approach provides mechanistic insight into how soil–plant interactions shape the metabolic resilience of citrus under water-limited field environments.

## Linked entities

- **Species:** Citrus sinensis (taxon 2711)

## Full-text entities

- **Chemicals:** proline (MESH:D011392), tricarboxylic acid (MESH:D014233), zeolite (MESH:D017641), carbon (MESH:D002244), citrate (MESH:D019343), 1H (-), fructose (MESH:D005632), T4 (MESH:D013974), glucose (MESH:D005947), sugars (MESH:D000073893), amino acids (MESH:D000596), nitrogen (MESH:D009584)
- **Species:** Citrus sinensis (apfelsine, species) [taxon 2711], Citrus (genus) [taxon 2706]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12899819/full.md

## References

88 references — full list in the complete paper: https://tomesphere.com/paper/PMC12899819/full.md

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Source: https://tomesphere.com/paper/PMC12899819