# Varietal Differences in Kidney Beans Modulate Gut Microbiota and Inflammation During High-Fat Diet-Induced Obesity in Male Mice

**Authors:** Alexane F. Rodrigue, Bruna B. Pereira, Giorgio Freije, Allison Sweet, Laili Mahmoudian, Mahmoud Aly, Salma Mahmoodianfard, Lalit Kishore, Marie-Claude Audet, Marcos F. Minicucci, K. Peter Pauls, Krista A. Power

PMC · DOI: 10.3390/nu18030461 · Nutrients · 2026-01-30

## TL;DR

Different kidney bean varieties affect gut bacteria and inflammation in obese mice, with dark red beans showing stronger benefits.

## Contribution

Demonstrates that dark red kidney beans have stronger anti-inflammatory effects than white beans in obesity.

## Key findings

- Bean-supplemented diets increased gut microbial diversity and SCFA-producing bacteria.
- Dark red kidney beans reduced inflammation in the gut, blood, and brain more effectively than white beans.
- SCFA levels correlated inversely with inflammatory markers in mice fed dark red beans.

## Abstract

Background: Obesity-associated inflammation arises from adipose dysfunction and intestinal disturbances, including altered microbiota and short-chain fatty acid (SCFA) metabolism. Beans (Phaseolus vulgaris) are rich in non-digestible carbohydrates and polyphenols, but whether kidney bean varieties differing in seed coat colour exert distinct effects on inflammation in obesity remains unclear. Objective: To determine whether supplementation of an obesogenic high-fat (HF) diet with white or dark red kidney beans modulates gut microbiota, SCFAs, and intestinal, systemic, and neuroinflammatory outcomes. Methods: Male C57Bl/6N mice (n = 12/group) were fed a basal diet (BD; modified AIN-93G), an HF diet (60% kcal from fat), or an HF diet supplemented with 15% cooked white (HF + WK) or dark red kidney beans (HF + DK) for nine weeks. Outcomes included cecal microbiota composition, predicted KEGG pathways with taxon contributors mapped with BURRITO (a tool for linking predicted microbial functions to contributing taxa), and SCFA-related pathways; cecal and fecal SCFA concentrations; colon histomorphometry and expression of gut barrier junction and inflammatory genes; serum cytokines and adipose hormones; and hippocampal inflammatory and barrier genes. Results: Mice consuming bean-supplemented HF diets had higher microbial diversity, enrichment of SCFA-producing taxa (Prevotella, Lactobacillus, Muribaculaceae), and lower obesity-associated genera versus HF alone (Mucispirillum, rc4-4). Bean diets elevated cecal acetate and butyrate concentrations, which aligned with increases in predicted acetate kinase in both bean groups versus HF and BD, and butyrate kinase in HF + DK versus BD. Bean supplementation attenuated HF-induced reduction of goblet cells and systemic interleukin (IL)-10. The HF + DK group had lower colonic tumour necrosis factor (TNF)-α and partially attenuated hippocampal IL-6. SCFAs were inversely associated with systemic and neuroinflammatory markers in HF + DK mice. Conclusions: Kidney bean supplementation mitigated HF diet-induced intestinal, systemic, and neuroinflammatory disturbances in male mice, with microbiota and SCFA modulation. Further, dark red beans exerted stronger anti-inflammatory effects, highlighting the role of seed coat colour in bean-mediated obesity outcomes.

## Linked entities

- **Diseases:** obesity (MONDO:0011122)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** neuroinflammatory (MESH:D000090862), Obesity (MESH:D009765), Inflammation (MESH:D007249), adipose dysfunction (MESH:D018205)
- **Chemicals:** butyrate (MESH:D002087), SCFA (MESH:D005232), Fat (MESH:D005223), polyphenols (MESH:D059808), Bean (-), carbohydrates (MESH:D002241), acetate (MESH:D000085)
- **Species:** Mucispirillum (genus) [taxon 248038], Prevotella (genus) [taxon 838], Phaseolus vulgaris (common bean, species) [taxon 3885], Mus musculus (house mouse, species) [taxon 10090], Lactobacillus (genus) [taxon 1578]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12899357/full.md

## References

161 references — full list in the complete paper: https://tomesphere.com/paper/PMC12899357/full.md

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Source: https://tomesphere.com/paper/PMC12899357