# Comprehensive spatial and immune profiling of metastatic mismatch repair–deficient colorectal cancer reveals response to immunotherapy

**Authors:** Ilkyu Park, Hari Kang, Se-Hee Kim, YunJae Jung, Won-Suk Lee

PMC · DOI: 10.1093/immadv/ltag001 · Immunotherapy Advances · 2026-01-09

## TL;DR

This study explores why some mismatch repair-deficient colorectal cancers respond to immunotherapy while others don't, using detailed spatial and immune profiling.

## Contribution

The study reveals how spatial immune architecture and macrophage polarization influence immunotherapy response in metastatic dMMR colorectal cancer.

## Key findings

- Responsive lesions showed enriched cytotoxic and interferon-γ signatures and greater CD8+ T-cell infiltration.
- Resistant lesions had immunosuppressive features like SPP1+ and CD163+ macrophages and TGF-β–mediated matrix remodeling.
- Spatial proximity between PD-L1+ tumor cells and M1-like macrophages was associated with treatment response.

## Abstract

Mismatch repair-deficient (dMMR) colorectal cancers (CRCs) exhibit variable clinical responses to immune checkpoint inhibitors (ICIs) despite their high immunogenicity.

To investigate the molecular and spatial determinants of this heterogeneity, we analyzed five metastatic sites (colon, liver, peritoneum, left ovary, and right ovary) from a dMMR CRC patient treated with pembrolizumab using bulk and single-cell RNA sequencing combined with multiplex immunohistochemistry.

Responsive lesions were characterized by enriched cytotoxic and interferon-γ signatures, greater CD8+ T-cell infiltration, and close spatial proximity between programmed death-ligand 1(PD-L1)+ tumor cells and M1-like macrophages. In contrast, resistant lesions demonstrated reduced effector cell presence and were enriched in immunosuppressive programs, including SPP1+ and CD163+ macrophages, noncanonical WNT5A/B signaling, and TGF-β–mediated matrix remodeling.

Collectively, these findings highlight the importance of spatial immune architecture and macrophage polarization in shaping ICI responses in dMMR CRC and underscore the need for spatial profiling to guide immunotherapy strategies in metastatic disease.

Graphical Abstract

## Linked entities

- **Genes:** SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696], WNT5A (Wnt family member 5A) [NCBI Gene 7474], WNT5B (Wnt family member 5B) [NCBI Gene 81029], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040]
- **Proteins:** CD274 (CD274 molecule), CD8A (CD8 subunit alpha), CD163 (CD163 molecule)
- **Diseases:** colorectal cancer (MONDO:0005575)

## Full-text entities

- **Genes:** CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CD274 (CD274 molecule) [NCBI Gene 29126] {aka ADMIO5, B7-H, B7H1, PD-L1, PDCD1L1, PDCD1LG1}
- **Diseases:** tumor (MESH:D009369), CRC (MESH:D015179)
- **Chemicals:** pembrolizumab (MESH:C582435)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12898929/full.md

## References

28 references — full list in the complete paper: https://tomesphere.com/paper/PMC12898929/full.md

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Source: https://tomesphere.com/paper/PMC12898929