# Chloride-Transporting OsHKT1;1 Splice Variants and Their Expression Profiles Under Salinity Stress in Rice

**Authors:** Shahin Imran, Shuntaro Ono, Rie Horie, Maki Katsuhara, Tomoaki Horie

PMC · DOI: 10.3390/ijms27031178 · International Journal of Molecular Sciences · 2026-01-23

## TL;DR

This study investigates how different versions of a rice transporter protein handle salt stress, revealing that one variant mainly transports chloride instead of sodium.

## Contribution

The study reveals the chloride-transporting function of OsHKT1;1-V2 splice variant, contrasting with the sodium-selective full-length variant.

## Key findings

- OsHKT1;1-V2 primarily transports Cl− with weak Na+ selectivity, unlike the Na+-selective OsHKT1;1-FL.
- OsHKT1;1-V2 localizes to the plasma membrane and accumulates Cl− in oocytes.
- Nipponbare rice has higher OsHKT1;1-FL transcripts and lower OsHKT1;1-V2 transcripts under salt stress compared to Pokkali.

## Abstract

OsHKT1;1, a member of the high-affinity K+ transporter (HKT) family, plays a key role in Na+ homeostasis and salinity tolerance in rice. In our previous study, multiple potential OsHKT1;1 splicing variants were identified, as well as the full-length (FL) OsHKT1;1 transcript from the salt-tolerant rice Pokkali. However, most previous studies focused solely on the full-length protein, leaving the transport functions of splice variants largely unexamined. In this study, we focused on the splice variant OsHKT1;1-V2 and compared its function and gene expression with those of OsHKT1;1-FL. Two-electrode voltage clamp experiments using Xenopus laevis oocytes revealed that the 1st start codon of OsHKT1;1-V2 is functional to exhibit bidirectional currents in bath solutions containing NaCl. Unlike the Na+-selective feature of OsHKT1;1-FL, OsHKT1;1-V2 primarily mediated Cl− transport with weak Na+ selectivity, which was supported by the higher Cl− accumulation in OsHKT1;1-V2–expressing oocytes. Subcellular localization analyses using oocytes and Arabidopsis mesophyll cells indicated plasma membrane localization of OsHKT1;1-V2, similar to OsHKT1;1-FL. Functional assays using a yeast mutant further indicated that OsHKT1;1-FL, but not OsHKT1;1-V2, mediates Na+ uptake. The same OsHKT1;1 variants were identified in the japonica cultivar Nipponbare, and OsHKT1;1-V2 of the cultivar showed Cl− transport properties similar to the one from Pokkali. Quantitative PCR analyses revealed higher abundance of OsHKT1;1-FL transcripts in Nipponbare than in Pokkali with markedly lower OsHKT1;1-V2 levels in Pokkali under salt stress. This study provides a new insight into HKT-mediated ion homeostasis under salinity stress.

## Linked entities

- **Genes:** HKT1;1 (cation transporter HKT4-like) [NCBI Gene 9266695]
- **Proteins:** HKT1;1 (cation transporter HKT4-like)
- **Chemicals:** NaCl (PubChem CID 5234), Cl− (PubChem CID 312), Na+ (PubChem CID 923)
- **Species:** Oryza sativa (taxon 4530), Xenopus laevis (taxon 8355), Arabidopsis (taxon 3701), Saccharomyces cerevisiae (taxon 4932)

## Full-text entities

- **Chemicals:** salt (MESH:D012492), Cl- (MESH:D002713), Na+ (MESH:D012964), NaCl (MESH:D012965)
- **Species:** Oryza sativa (Asian cultivated rice, species) [taxon 4530], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Xenopus laevis (African clawed frog, species) [taxon 8355], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12898316/full.md

## References

68 references — full list in the complete paper: https://tomesphere.com/paper/PMC12898316/full.md

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Source: https://tomesphere.com/paper/PMC12898316