# Notch Signalling Plays a Role in Patterning the Ventral Mesoderm During Early Embryogenesis in Drosophila melanogaster

**Authors:** Marvel Megaly, Gregory Foran, Arsala Ali, Anel Turgambayeva, Tai Sengsouriya, Samantha Berube, Ryan Douglas Hallam, Ping Liang, Aleksandar Necakov

PMC · DOI: 10.3390/ijms27031284 · International Journal of Molecular Sciences · 2026-01-27

## TL;DR

This study shows that Notch signaling helps shape the ventral mesoderm in early fruit fly embryos by regulating gene expression and cell patterning.

## Contribution

The study introduces a novel optogenetic tool to control Notch signaling and reveals its role in early mesoderm development in Drosophila.

## Key findings

- Notch signaling regulates a set of mesodermal genes during early embryogenesis.
- Notch signaling indirectly influences dorsal–ventral patterning via the Toll pathway and Dorsal/Twist/Snail network.
- Notch signaling establishes the mesoderm–mesectoderm–ectoderm boundary through gene expression regulation.

## Abstract

Notch signalling is a critical regulator of multiple developmental processes through its ability to control gene expression and thereby influence cell fate specification and cell proliferation through direct cell–cell communication. Although Notch signalling has been implicated in myogenesis during late embryogenesis, its role in early mesoderm development has been largely unexplored. Endocytosis of the Notch ligand Delta and the Notch receptor extracellular domain, a critical step in Notch pathway activation, has been extensively observed in the ventral mesoderm of the early Drosophila embryo, indicating a potential for Notch signalling activity in this early germ layer. Here, we present evidence that genes critical to mesoderm development require and are responsive to Notch signalling activity. Using a novel light-inducible Optogenetic variant of the Notch intracellular domain (OptoNotch), which affords precise spatial and temporal control over ectopic activation of Notch signalling, in combination with high-resolution fluorescent RNA in situ hybridization and qPCR, we identified a set of mesodermal genes whose expression is directly regulated by Notch signalling. We also provide evidence that Notch signalling indirectly regulates the dorsal–ventral patterning program mediated by the Toll signalling pathway through the Dorsal/Twist/Snail gene network. Our findings demonstrate that Notch signalling regulates ventral mesoderm patterning and is critical for establishing the mesoderm–mesectoderm–ectoderm boundary by regulating gene expression patterns and providing negative feedback on the upstream patterning network.

## Linked entities

- **Genes:** Notch (neurogenic locus notch homolog) [NCBI Gene 100616083], PSMB6 (proteasome 20S subunit beta 6) [NCBI Gene 5694], Dorsal (embryonic polarity protein dorsal) [NCBI Gene 692440], TWIST1 (twist family bHLH transcription factor 1) [NCBI Gene 7291], SNAI1 (snail family transcriptional repressor 1) [NCBI Gene 6615]
- **Species:** Drosophila melanogaster (taxon 7227)

## Full-text entities

- **Genes:** N (Notch) [NCBI Gene 31293] {aka 1.1, 16-178, 16-55, Ax, CG3936, CT13012}, sna (snail) [NCBI Gene 34908] {aka BG:DS01845.1, CG3956, Dmel\CG3956, SNAIL, Sco, Snail}, Tl (Toll) [NCBI Gene 43222] {aka CG5490, CT17414, Dmel\CG5490, EP(3)1051, EP1051, Fs(1)Tl}, twi (twist) [NCBI Gene 37655] {aka CG2956, DTwist, Dmel\CG2956, EC9, Tw, Twist}, dl (dorsal) [NCBI Gene 35047] {aka CG6667, Dmel\CG6667, Dor, Dorsal, GSd447, NF-KB}
- **Species:** Drosophila melanogaster (fruit fly, species) [taxon 7227]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12898112/full.md

## References

58 references — full list in the complete paper: https://tomesphere.com/paper/PMC12898112/full.md

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Source: https://tomesphere.com/paper/PMC12898112