# Segmentation-Guided Preprocessing Improves Deep Learning Diagnostic Accuracy and Confidence of Ameloblastoma and Odontogenic Keratocyst in Cone Beam CT Images—A Preliminary Study

**Authors:** Xinyue Zhang, Yuxuan Yang, Chen Zhong, Jupeng Li, Gang Li

PMC · DOI: 10.3390/diagnostics16030416 · Diagnostics · 2026-02-01

## TL;DR

This study shows that using segmentation-guided preprocessing improves deep learning models' accuracy and reliability in diagnosing ameloblastoma and odontogenic keratocyst from cone beam CT images.

## Contribution

The novel contribution is introducing segmentation-guided preprocessing to enhance diagnostic accuracy and model interpretability in dental imaging.

## Key findings

- Segmentation-guided ROI models outperformed original slice models in diagnostic accuracy and confidence.
- Moderately expanded ROI achieved optimal performance with consistent prediction patterns.
- Grad-CAM and confidence curve analysis confirmed better attention localization and reliability.

## Abstract

Objectives: The differential diagnosis of ameloblastoma and odontogenic keratocyst is essential for surgical planning and patient counseling. While deep learning (DL)-based methods show promising potential in this domain, their clinical translation remains challenging due to insufficient interpretability. This study aims to introduce segmentation-guided preprocessing approaches to provide support for the clinical implementation of computer-aided diagnosis systems. Methods: This study evaluated the performance of an InceptionV3 model on 128 pathologically confirmed CBCT scans (AME: 64; OKC: 64) by 5-fold cross-validation. Four experimental inputs were compared: (1) Original slice; (2) Bounding-box ROI; (3) Precise segmentation ROI; and (4) Moderately expanded ROI. All models were trained under the same settings. Assessment was conducted on both the slice and patient levels, incorporating accuracy, recall, precision, F1-score, and the area under the receiver operating characteristic curve (AUC). Grad-CAM visualization and confidence curve analysis were employed to verify models’ attention patterns and diagnostic confidence. Results: All models based on segmentation-guided ROI significantly outperformed models based on original slice. The moderately expanded ROI achieved optimal performance. The bounding-box ROI provided competitive performance with higher recall. Grad-CAM confirmed improved attention localization, while confidence curve analysis showed more consistent and reliable prediction patterns across slices. Conclusions: Segmentation-guided preprocessing represents an effective and clinically relevant approach for jaw lesion diagnosis and enhances interpretability.

## Linked entities

- **Diseases:** ameloblastoma (MONDO:0017795), odontogenic keratocyst (MONDO:0018648)

## Full-text entities

- **Diseases:** jaw lesion (MESH:D007571), Ameloblastoma (MESH:D000564), Odontogenic Keratocyst (MESH:D009807)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12897079/full.md

## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12897079/full.md

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Source: https://tomesphere.com/paper/PMC12897079