# Dual Effect of EZH2 Gene Editing with CRISPR/Cas9 in Lung Cancer

**Authors:** Joice M. Menezes, Diego C. de Mello, Kelly C. Saito, Edna T. Kimura, Cesar S. Fuziwara

PMC · DOI: 10.3390/biology15030251 · 2026-01-29

## TL;DR

This study shows that editing the EZH2 gene in lung cancer has both tumor-suppressing and tumor-promoting effects depending on the context, highlighting challenges in targeting this gene for treatment.

## Contribution

The study reveals a dual and context-dependent role of EZH2 in lung cancer, emphasizing compensatory mechanisms when targeting this epigenetic regulator.

## Key findings

- EZH2 inhibition in vitro reduces cell proliferation and promotes differentiation-related gene expression.
- EZH2 gene-edited cells form larger tumors in mice, accompanied by increased expression of other PcG genes.
- Compensatory interactions between PRC2 and PRC1 complexes suggest challenges in targeting EZH2 alone for therapy.

## Abstract

Searching for new molecular targets for lung cancer is essential to understand aggressiveness and early metastatic spread and provide new treatment alternatives. This study indicates a dual and cell context-dependent role for EZH2 activation and points out the challenges of targeting this epigenetic regulator in lung cancer. Our findings demonstrate that EZH2 inhibition induces tumor suppressor effects in vitro, promoting cell differentiation, but can trigger compensatory epigenetic mechanisms that promote tumor progression in vivo. This study highlights the plasticity of the networks regulated by Polycomb group (PcG) genes, raising important considerations for the use of epigenetic therapies in lung cancer, including EZH2 inhibitors or even EZH2 gene editing, either alone or in combination with the inhibition of other PcG genes.

Lung adenocarcinoma is the most common form of lung cancer with a 5-year survival rate of 15%, largely due to asymptomatic metastasis and late diagnosis. Overexpression of Polycomb group (PcG) proteins, particularly EZH2, the catalytic component of Polycomb Repressive Complex 2 (PRC2), has been associated with the pathogenesis of lung cancer, frequently showing correlation with cancer progression and poor prognosis. In this study, EZH2 levels were modulated by CRISPR/Cas9 gene editing and PRC2 activity was inhibited with EZH2 inhibitor EPZ6438 or EED inhibitor MAK683. EZH2 gene editing reduced cell proliferation, migration, invasion, and colony formation and reduced NFκ-B signaling activation, indicating an antitumoral effect in vitro. Moreover, EZH2 inhibition also increased the expression of differentiation-related genes, such as GATA5, FOXA2, and lung surfactants, indicating a pro-differentiation effect. However, EZH2-edited cells injected into an immunocompromised mouse model generated larger tumors compared to unedited cells. This was accompanied by increased expression of other PcG genes, including EZH1, CBX2, RING1, EED, and SUZ12, suggesting a compensatory interaction between PRC2 and PRC1 complexes. These findings provide significant clinical relevance, both in elucidating the mechanisms of novel molecular targets and in guiding treatment strategies for lung cancer when using epigenetic inhibitors.

## Linked entities

- **Genes:** EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 2146], EZH1 (enhancer of zeste 1 polycomb repressive complex 2 subunit) [NCBI Gene 2145], CBX2 (chromobox 2) [NCBI Gene 84733], RING1 (ring finger protein 1) [NCBI Gene 6015], EED (embryonic ectoderm development) [NCBI Gene 8726], SUZ12 (SUZ12 polycomb repressive complex 2 subunit) [NCBI Gene 23512], GATA5 (GATA binding protein 5) [NCBI Gene 140628], FOXA2 (forkhead box A2) [NCBI Gene 3170]
- **Proteins:** EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit), NFKB1 (nuclear factor kappa B subunit 1)
- **Chemicals:** EPZ6438 (PubChem CID 66558664), MAK683 (PubChem CID 121412508)
- **Diseases:** lung cancer (MONDO:0005138), lung adenocarcinoma (MONDO:0005061)

## Full-text entities

- **Genes:** Ezh2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 14056] {aka Enx-1, Enx1h, KMT6, mKIAA4065}, Foxa2 (forkhead box A2) [NCBI Gene 15376] {aka HNF3-beta, HNF3beta, Hnf-3b, Hnf3b, Tcf-3b, Tcf3b}, Ring1 (ring finger protein 1) [NCBI Gene 19763] {aka Ring1A}, Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Suz12 (SUZ12 polycomb repressive complex 2 subunit) [NCBI Gene 52615] {aka 2610028O16Rik, D11Ertd530e, mKIAA0160}, Gata5 (GATA binding protein 5) [NCBI Gene 14464], Eed (embryonic ectoderm development) [NCBI Gene 13626] {aka l(7)5Rn, l7Rn5, lusk}, Prc1 (protein regulator of cytokinesis 1) [NCBI Gene 233406] {aka D7Ertd348e}, Cbx2 (chromobox 2) [NCBI Gene 12416] {aka M33, MOD2, pc}, Ezh1 (enhancer of zeste 1 polycomb repressive complex 2 subunit) [NCBI Gene 14055] {aka ENX-2}
- **Diseases:** Lung Cancer (MESH:D008175), cancer (MESH:D009369), metastasis (MESH:D009362), Lung adenocarcinoma (MESH:D000077192)
- **Chemicals:** MAK683 (-), EPZ6438 (MESH:C000593333)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12896556/full.md

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Source: https://tomesphere.com/paper/PMC12896556