# Targeting lysine methyltransferase 2C deficiency: New frontiers in breast cancer therapy and prognosis

**Authors:** Shuangmei Tong, Qiu Wang, Yun Chen, Zunjie Bo, Ya Zhang, Yan Liu

PMC · DOI: 10.1002/ctm2.70617 · Clinical and Translational Medicine · 2026-02-11

## TL;DR

This paper reviews how KMT2C deficiency contributes to breast cancer progression and explores new treatment strategies for tumors with this mutation.

## Contribution

The paper provides a comprehensive overview of KMT2C's role in breast cancer and highlights novel therapeutic approaches for KMT2C-deficient tumors.

## Key findings

- KMT2C deficiency is linked to tumor heterogeneity, metastasis, and therapy resistance in breast cancer.
- KMT2C interacts with oncogenic pathways like IFNγ-EMT/MET and MAPK/ERK-RAS/PI3K/AKT/mTOR.
- Targeted therapies such as epigenetic modulators and DDR inhibitors show promise for KMT2C-deficient tumors.

## Abstract

Loss‐of‐function mutations in lysine methyltransferase 2 (KMT2C) are frequently observed in breast cancer and are significantly associated with enhanced tumour heterogeneity, aggressive clinical behaviour, and poor prognosis. Although KMT2C has been established as a tumour suppressor, the precise molecular mechanisms by which its deficiency drives metastasis and therapy resistance remain incompletely understood. This review comprehensively examines the multifaceted roles of KMT2C in breast cancer pathogenesis, with a particular emphasis on its interplay with critical oncogenic signalling networks and functional axes, including the IFNγ‐EMT/MET axis, the MAPK/ERK and RAS/PI3K/AKT/mTOR pathways, and the KDM6A–MMP3 regulatory circuit. Furthermore, we discuss emerging therapeutic strategies for KMT2C‐deficient breast cancers, such as epigenetic modulators (EZH2 inhibitors, KDM6A inhibitors, and BET inhibitors), DNA damage response (DDR)‐targeting agents, and pathway‐specific inhibitors. These insights not only elucidate the complex biological functions of KMT2C in breast cancer but also provide a rationale for developing precision therapies tailored to KMT2C‐mutant tumours.

This graphical abstract illustrates the role of KMT2C loss‐of‐function in promoting breast cancer progression and therapeutic vulnerability. KMT2C deficiency drives tumor heterogeneity, metastasis, and therapy resistance by activating oncogenic pathways such as IFNγEMT/MET and MAPK/ERKRAS/PI3K/AKT/mTOR, along with epigenetic remodeling via the KDM6AMMP3 axis. These alterations concurrently create opportunities for targeted treatment using epigenetic drugs, DDR inhibitors, and pathway‐specific therapies.

## Linked entities

- **Genes:** KMT2C (lysine methyltransferase 2C) [NCBI Gene 58508], KDM6A (lysine demethylase 6A) [NCBI Gene 7403], MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314], EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 2146], DNER (delta/notch like EGF repeat containing) [NCBI Gene 92737]
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314] {aka CHDS6, MMP-3, SL-1, STMY, STMY1, STR1}, DNER (delta/notch like EGF repeat containing) [NCBI Gene 92737] {aka UNQ26, bet}, KMT2C (lysine methyltransferase 2C) [NCBI Gene 58508] {aka HALR, KLEFS2, MLL3}, KDM6A (lysine demethylase 6A) [NCBI Gene 7403] {aka KABUK2, UTX, bA386N14.2}, EZH2 (enhancer of zeste 2 polycomb repressive complex 2 subunit) [NCBI Gene 2146] {aka ENX-1, ENX1, EZH2b, KMT6, KMT6A, WVS}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, SLTM (SAFB like transcription modulator) [NCBI Gene 79811] {aka Met}
- **Diseases:** metastasis (MESH:D009362), breast cancer (MESH:D001943), tumour (MESH:D009369)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12894782/full.md

## References

118 references — full list in the complete paper: https://tomesphere.com/paper/PMC12894782/full.md

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Source: https://tomesphere.com/paper/PMC12894782