# TANGO: Analysis and curation of particles in cryo-electron tomography

**Authors:** Markus Schreiber, Beata Turoňová

PMC · DOI: 10.1038/s41467-026-69195-5 · Nature Communications · 2026-02-10

## TL;DR

TANGO is a new tool for analyzing the spatial organization of particles in cryo-electron tomography data, enabling better understanding of cellular structures.

## Contribution

TANGO introduces a modular framework using twist vectors for rotationally invariant analysis of particle arrangements in cryo-ET.

## Key findings

- TANGO encodes particle positions and orientations as twist vectors for spatial pattern analysis.
- The framework supports features like neighborhood occupancy and angular deviations in cryo-ET datasets.
- TANGO's open-source design allows customization for diverse biological samples.

## Abstract

Cryo-electron tomography (cryo-ET) enables the visualization of cellular structures in near-native environments, but its potential for spatial analysis has been underutilized due to a lack of versatile tools accommodating biological sample diversity. Available solutions often rely on case-specific or hypothesis-driven approaches, while holistic analyses remain challenging. In this work, we introduce TANGO (Twist-Aware Neighborhoods for Geometric Organization), a framework leveraging point cloud descriptors to analyze spatial arrangements of particles, such as macromolecular complexes, in cryo-ET. By encoding relative positions and orientations of particles as twist vectors, TANGO enables rotationally invariant feature extraction, including structured neighborhood occupancy, lattice topology, or angular deviations. Its modular design and user-friendly interface allow for customization of features, facilitating exploratory analyses of spatial patterns in diverse experimental datasets. With its open-source Python implementation, TANGO advances the ability to decode complex cellular architectures and their functional relationships, offering a particle data analysis tool for the cryo-ET community.

Cryo-electron tomography visualizes molecules inside cells, but it lacks flexible tools to study their spatial organization. The authors present TANGO, a framework that utilizes neighborhoods of particles to detect patterns in their organization.

## Full-text entities

- **Genes:** NPC1 (NPC intracellular cholesterol transporter 1) [NCBI Gene 4864] {aka NPC, POGZ, SLC65A1}, CASP1 (caspase 1) [NCBI Gene 834] {aka ICE, IL1BC, P45}, TWIST1 (twist family bHLH transcription factor 1) [NCBI Gene 7291] {aka ACS3, BPES2, BPES3, CRS, CRS1, CSO}, SP1 (Sp1 transcription factor) [NCBI Gene 6667]
- **Diseases:** PCD (MESH:D007619), PCDs (MESH:C535990), rotation (MESH:D009759)
- **Chemicals:** EMD-10398 (-), A (MESH:D001151), Homoharringtonine (MESH:D000077863)
- **Species:** Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Human immunodeficiency virus 1 (no rank) [taxon 11676], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030)

## Full text

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## Figures

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## References

18 references — full list in the complete paper: https://tomesphere.com/paper/PMC12894703/full.md

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Source: https://tomesphere.com/paper/PMC12894703