# CRISPR screens identify PRMT7 as a therapeutic target to enhance T cell-mediated killing in breast cancer

**Authors:** Wei Shi, Yi Luo, Yizhuo Wang, Jacqueline M. Burrows, Debra Black, Andrew Civitarese, Laura Perlaza-Jimenez, Ping Zhang, Murray Manning, Natasha Tuano, Miguel E. Rentería, Christos Xiao, Siok-Keen Tey, Joseph Rosenbluh, Corey Smith, Georgia Chenevix-Trench, Jonathan Beesley

PMC · DOI: 10.1038/s41523-025-00888-8 · 2026-01-21

## TL;DR

This study uses CRISPR screens to identify PRMT7 as a potential target to improve T cell-based cancer therapies for breast cancer.

## Contribution

The study identifies PRMT7 as a novel therapeutic target that enhances T cell-mediated killing in breast cancer.

## Key findings

- PRMT7 inhibition increases sensitivity of breast cancer cells to T cell killing in vitro.
- PRMT7 expression is negatively correlated with CD8+ T cell infiltration and patient survival in breast cancer.
- Prmt7-deficient tumors show reduced growth and increased T cell infiltration in mice.

## Abstract

Genome-wide association studies (GWAS) have identified more than 220 loci associated with breast cancer susceptibility, yet identifying effector genes, their modes of action and prioritising therapeutic targets remains a significant challenge. To address this, we performed pooled CRISPR knockout and inhibition screens to identify genes at risk loci that influence cytotoxic T lymphocyte (CTL) killing of MCF7 breast cancer cells in co-culture. These screens uncovered 33 candidate modulating genes, of which we validated six by single gene editing in two cell lines. Deletion of IRF1, ATF7IP, and CASP8 conferred resistance to CTL killing, while disruption of CFLAR, CREBBP and PRMT7 enhanced sensitivity. Analysis of clinical data showed that PRMT7 expression is negatively correlated with CD8+ infiltration and survival in breast cancer patient cohorts. Pharmacological inhibition of PRMT7 sensitized breast cells to CTL killing in vitro, and Prmt7-deficient tumors exhibited reduced growth and increased CD8+ T cell infiltration in immunocompetent mice. Enhanced Prmt7-dependent tumor growth was not observed in immunodeficient mice, implicating Prmt7 in immune evasion. This study underscores the utility of CRISPR screens for high-throughput functional follow-up of GWAS findings and identifies PRMT7 inhibition as a promising therapeutic strategy.

## Linked entities

- **Genes:** PRMT7 (protein arginine methyltransferase 7) [NCBI Gene 54496], IRF1 (interferon regulatory factor 1) [NCBI Gene 3659], ATF7IP (activating transcription factor 7 interacting protein) [NCBI Gene 55729], CASP8 (caspase 8) [NCBI Gene 841], CFLAR (CASP8 and FADD like apoptosis regulator) [NCBI Gene 8837], CREBBP (CREB binding lysine acetyltransferase) [NCBI Gene 1387]
- **Diseases:** breast cancer (MONDO:0004989)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CASP8 (caspase 8) [NCBI Gene 841] {aka ALPS2B, CAP4, Casp-8, FLICE, MACH, MCH5}, CREBBP (CREB binding lysine acetyltransferase) [NCBI Gene 1387] {aka CBP, KAT3A, MKHK1, RSTS, RSTS1}, CFLAR (CASP8 and FADD like apoptosis regulator) [NCBI Gene 8837] {aka CASH, CASP8AP1, CLARP, Casper, FLAME, FLAME-1}, ATF7IP (activating transcription factor 7 interacting protein) [NCBI Gene 55729] {aka AM, ATF-IP, ATF7IP1, MCAF, MCAF1, p621}, PRMT7 (protein arginine methyltransferase 7) [NCBI Gene 54496] {aka SBIDDS}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, IRF1 (interferon regulatory factor 1) [NCBI Gene 3659] {aka IMD117, IRF-1, MAR}
- **Diseases:** tumor (MESH:D009369), breast cancer (MESH:D001943)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12891518/full.md

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Source: https://tomesphere.com/paper/PMC12891518