# Advances in epigenetics of gastric cancer

**Authors:** Rihua Zeng, Jianning Chen

PMC · DOI: 10.3389/or.2026.1656621 · 2026-01-28

## TL;DR

This paper reviews how epigenetic changes contribute to gastric cancer and explores their potential as diagnostic tools and treatment targets.

## Contribution

The paper systematically examines novel epigenetic mechanisms and their translational applications in gastric cancer.

## Key findings

- Aberrant methylation of tumor suppressor genes like CDH1 and RUNX3 is linked to early gastric cancer development.
- Histone lactylation and acetylation influence immune evasion in gastric cancer.
- Non-coding RNAs and m6A RNA modifications show promise as biomarkers and resistance factors.

## Abstract

Gastric cancer (GC) persists as a leading cause of global cancer morbidity and mortality, with its pathogenesis intricately linked to epigenetic dysregulation. Emerging research specifies the novelty of these mechanisms—including DNA methylation, histone modifications, non-coding RNAs (ncRNAs), and RNA modifications—in GC initiation, progression, and therapeutic resistance. This review systematically examines key epigenetic mechanisms in GC, dissect the therapeutic implications as diagnostic biomarkers and therapeutic targets. Key insights include (1) aberrant methylation of tumor suppressor genes (e.g., CDH1, RUNX3): in early carcinogenesis; (2) histone lactylation and acetylation modulating immune evasion (3) ncRNAs (e.g., miR-21, HOTAIR); as promising biomarkers; and (4) m6A RNA modification in chemotherapy resistance. We further discuss translational applications of epigenetic biomarkers in liquid biopsies and targeted therapies (e.g., DNMT/HDAC inhibitors). Integrating multi-omics and epigenetic editing technologies may advance precision medicine in GC.

## Linked entities

- **Genes:** CDH1 (cadherin 1) [NCBI Gene 999], RUNX3 (RUNX family transcription factor 3) [NCBI Gene 864]
- **Diseases:** gastric cancer (MONDO:0001056)

## Full-text entities

- **Genes:** DNMT1 (DNA methyltransferase 1) [NCBI Gene 1786] {aka ADCADN, AIM, CXXC9, DNMT, HSN1E, MCMT}, RUNX3 (RUNX family transcription factor 3) [NCBI Gene 864] {aka AML2, CBFA3, PEBP2aC}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, MIR21 (microRNA 21) [NCBI Gene 406991] {aka MIRN21, hsa-mir-21, miR-21, miRNA21}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, HOTAIR (HOX transcript antisense RNA) [NCBI Gene 100124700] {aka HOXAS, HOXC-AS4, HOXC11-AS1, NCRNA00072}
- **Diseases:** carcinogenesis (MESH:D063646), cancer (MESH:D009369), GC (MESH:D013274)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12891141/full.md

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Source: https://tomesphere.com/paper/PMC12891141