# Spatial organization of Gardnerella species, Prevotella bivia, and Fannyhessea vaginae in the bacterial vaginosis biofilm

**Authors:** Sheridan D. George, Megan H. Amerson-Brown, Lúcia G. V. Sousa, Alexa H. Rinehart, Ashutosh Tamhane, Ashleigh N. Riegler, Sixto M. Leal, John W. Lammons, Jacob H. Elnaggar, Keonte J. Graves, Paweł Łaniewski, Melissa M. Herbst-Kralovetz, Christopher M. Taylor, Nuno Cerca, Christina A. Muzny

PMC · DOI: 10.1128/iai.00630-25 · Infection and Immunity · 2026-01-22

## TL;DR

This study examines how key bacteria involved in bacterial vaginosis form biofilms in the vagina, focusing on their spatial organization during the onset of the infection.

## Contribution

The study provides new insights into the spatial dynamics of BV-associated bacteria during the development of the infection.

## Key findings

- Gardnerella species were most abundant in the biofilm and increased progressively across layers during incident BV.
- Fannyhessea vaginae counts increased at later time points and higher biofilm layers, likely facilitated by Gardnerella.
- Controls had significantly lower counts of Gardnerella and F. vaginae compared to those with incident BV.

## Abstract

Key bacterial vaginosis (BV)-associated bacteria implicated in biofilm formation include Gardnerella species, Prevotella bivia, and Fannyhessea vaginae. We investigated their spatial organization in the BV biofilm over time from longitudinal vaginal specimens obtained from women with incident BV (iBV) using peptide nucleic acid-fluorescence in situ hybridization (PNA-FISH). Heterosexual women with optimal vaginal microbiota self-collected vaginal specimens twice daily for 60 days or until iBV development (Nugent score 7–10 on ≥4 consecutive specimens). Women who developed iBV were matched to healthy controls by age, race, and contraceptive method. Gardnerella spp., P. bivia, and F. vaginae were quantified using PNA-FISH 2 days pre-iBV, the day of iBV, and 2 days post-iBV across five optical layers (z, z + 2, z + 4, z + 6, and z + 8 μm). Total counts of all three bacterial species were significantly higher on the day of iBV compared to 2 days pre-iBV (P = 0.011) and remained elevated 2 days post-iBV. Across most layers and time points, pooled mean Gardnerella spp. counts were significantly higher than F. vaginae counts (P ≤ 0.022-0.0003). On the day of iBV and 2 days post-iBV, pooled mean counts of Gardnerella spp. and F. vaginae progressively increased across most biofilm layers (P ≤ 0.043-0.0012). Controls had significantly lower counts of Gardnerella spp. and F. vaginae. P. bivia had low counts in all specimens. During the critical time period surrounding iBV, Gardnerella spp. are abundant throughout the developing biofilm and facilitate F. vaginae incorporation at later time points and higher biofilm layers. Additional research, including other Prevotella spp., is needed.

Bacterial vaginosis (BV) is the most common vaginal infection in reproductive-age women worldwide with a global prevalence of 30%. Recurrence rates can be up to 60% within 1 year of treatment. While BV is characterized as a polymicrobial biofilm infection, the exact etiology remains unknown. The BV biofilm may persist after antibiotic treatment, possibly due to incomplete eradication by current antimicrobial therapies, contributing to recurrent infection. Data are limited in evaluating the spatial formation of the BV biofilm around the time of incident BV. Providing a better understanding of this critical time period in incident BV pathogenesis is necessary to inform the development of prevention methods aimed at inhibiting biofilm formation and improving long-term treatment outcomes.

## Linked entities

- **Diseases:** bacterial vaginosis (MONDO:0005316), BV (MONDO:0005316)
- **Species:** Prevotella bivia (taxon 28125), Fannyhessea vaginae (taxon 82135)

## Full-text entities

- **Diseases:** infection (MESH:D007239), BV (MESH:D016585), vaginal infection (MESH:D014627)
- **Chemicals:** PNA (MESH:D020135)
- **Species:** Prevotella bivia (species) [taxon 28125], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12890030/full.md

## References

44 references — full list in the complete paper: https://tomesphere.com/paper/PMC12890030/full.md

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Source: https://tomesphere.com/paper/PMC12890030