# Senescence-Linked Fibrosis in the Aging Human Ovary Revealed by p16-Based Histological Profiling and Spatial Transcriptomics

**Authors:** Birgit Schilling, Mark Watson, Pooja Devrukhkar, Natalia Murad, Fan Wu, Moo Joong Kim, Hannah Anvari, Uyen Tran, Nicolas Martin, Tommy Tran, Giuliana Zaza, Kevin Schneider, Bikem Soygur Kaya, Elisheva Shanes, Denis Wirtz, MaryEllen Pavone, Simon Melov, Pei Hsun Wu, David Furman, Francesca Duncan

PMC · DOI: 10.21203/rs.3.rs-8290960/v1 · Research Square · 2026-02-06

## TL;DR

This study maps senescent cells in aging human ovaries using p16 and spatial transcriptomics, revealing fibro-inflammatory niches that could be targeted to preserve ovarian function.

## Contribution

The study introduces BuckSenOvary, a 32-gene signature associated with p16-positive senescent ovarian regions.

## Key findings

- p16-positive senescent cells cluster in stromal, vascular, and cyst-associated regions of aging ovaries.
- BuckSenOvary is a 32-gene signature distinguishing p16-positive regions with fibro-inflammatory features.
- AI analysis shows p16-positive regions have architecturally complex collagen, indicating fibrotic changes.

## Abstract

Cellular senescence is implicated as a driver of ovarian aging, but senescent cells in the human postmenopausal ovary remain poorly defined. Using spatially resolved p16INK4a protein expression, a canonical senescence marker, we identified and mapped senescent cells in postmenopausal ovaries. We integrated p16 immunohistochemistry, multiplexed immunofluorescence, spatial transcriptomics, and AI-guided digital pathology to map senescent microenvironments. p16-positive cells formed discrete stromal, vascular, and cyst-associated clusters that increased with age and were enriched for macrophages and myofibroblast-like cells. Whole-transcriptome profiling of 92 spatial regions uncovered a 32-gene p16-associated signature, BuckSenOvary, that distinguished p16-positive regions across cortex and medulla. BuckSenOvary is characterized by suppression of cell-cycle regulators and activation of inflammatory and extracellular-matrix remodelling genes. AI-based collagen matrix analysis confirmed that p16-positive regions exhibit more architecturally complex collagen, demonstrating that focal senescent microenvironments are fibro-inflammatory. These findings position senescent ovarian niches as therapeutic targets to preserve ovarian function.

## Linked entities

- **Genes:** CDKN2A (cyclin dependent kinase inhibitor 2A) [NCBI Gene 1029]
- **Proteins:** CDKN2A (cyclin dependent kinase inhibitor 2A)

## Full-text entities

- **Genes:** CDKN2A (cyclin dependent kinase inhibitor 2A) [NCBI Gene 1029] {aka ARF, CAI2, CDK4I, CDKN2, CMM2, INK4}
- **Diseases:** Fibrosis (MESH:D005355), fibro-inflammatory (MESH:D009810), inflammatory (MESH:D007249)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12889806/full.md

## References

94 references — full list in the complete paper: https://tomesphere.com/paper/PMC12889806/full.md

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Source: https://tomesphere.com/paper/PMC12889806