# A stochastic simulation-based approach to inform the relapsing mouse model study design for non-clinical assessment of tuberculosis

**Authors:** James Clary, Jessica K. Roberts, Debra Hanna, Alessia Tagliavini, Sylvie Sordello, Anna Upton, David Hermann, Alexander Berg

PMC · DOI: 10.1128/aac.01103-25 · Antimicrobial Agents and Chemotherapy · 2025-12-29

## TL;DR

This paper presents a simulation-based method to optimize the design of mouse studies for testing tuberculosis treatments, reducing the number of animals needed while maintaining data quality.

## Contribution

A novel stochastic simulation approach to evaluate and optimize relapsing mouse model study designs for TB drug development.

## Key findings

- Using simulations, 28% fewer mice can be used in RMM studies without significant loss of precision.
- Alternative study designs maintain low bias and ±1–2 week precision for estimating T95 for most regimens.
- The method supports improved animal stewardship while generating reliable data for decision-making.

## Abstract

The development of new regimens to treat tuberculosis (TB), the disease caused by Mycobacterium tuberculosis, is critical to improving patient outcomes and decreasing global infectious disease mortality. Early evaluation of candidate regimens in non-clinical models of TB, such as the relapsing mouse model (RMM), remains an important step in prioritizing the most efficacious regimens for further clinical evaluation. Although RMM studies may be informative, they are also animal-, labor-, and time-intensive to complete and represent a significant investment in time and resources during non-clinical development. Given the strong pipeline of regimens in development, identification of “leaner” RMM studies may have a significant impact on resource utilization, and hence we compared alternative study designs to identify study attributes that can be modified to improve resource use, particularly animal use. By simulating relapse outcomes from “virtual” studies (i.e., groups of mice treated for selected durations with control and hypothetical anti-TB regimens) followed by model-based analysis of the simulated data, we were able to compare the “true” (input) values with model estimates of time to 95% cure probability (T95) and assess bias and precision of competing designs. Using this approach, we demonstrated that 28% fewer mice could be used in RMM studies while maintaining low bias and a precision for T95 estimation within ±1–2 weeks for most regimens. Therefore, it is expected that RMM studies based upon the alternative designs evaluated herein may be employed to promote improved animal stewardship while generating informative data for decision-making.

## Linked entities

- **Diseases:** tuberculosis (MONDO:0018076), TB (MONDO:0018076)
- **Species:** Mycobacterium tuberculosis (taxon 1773), Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** infectious disease (MESH:D003141), TB (MESH:D014376)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mycobacterium tuberculosis (species) [taxon 1773], Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

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## References

15 references — full list in the complete paper: https://tomesphere.com/paper/PMC12888889/full.md

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Source: https://tomesphere.com/paper/PMC12888889