# Microbial dysbiosis in cholangiocarcinoma

**Authors:** Yunjia Liu, Shaohui Huang, Yang Zhang, Yuankun Zhang, Yunfei Xu, Yongchang Tang, Sen Guo, Zongli Zhang

PMC · DOI: 10.3389/fmicb.2026.1727736 · Frontiers in Microbiology · 2026-01-27

## TL;DR

This review explores how changes in the microbial community may contribute to the development and progression of cholangiocarcinoma, a deadly bile duct cancer.

## Contribution

The paper provides a critical evaluation of microbiome alterations in cholangiocarcinoma and highlights methodological challenges in studying low-biomass biliary samples.

## Key findings

- Microbial dysbiosis may drive tumor progression through inflammation and metabolic changes.
- Microbiome alterations are linked to therapeutic resistance in cholangiocarcinoma.
- The review identifies challenges in distinguishing causal from associative evidence in microbiome studies.

## Abstract

Cholangiocarcinoma (CCA) is a highly aggressive malignancy of the biliary epithelium, with its incidence and mortality rates continuing to rise worldwide. Advances in high-throughput sequencing and metabolomic technologies have intensified interest in elucidating the role of the microbiome in CCA. Microbial dysbiosis may contribute to tumor initiation and progression by inducing chronic inflammation, altering metabolic pathways, and modulating the immune microenvironment. Moreover, these microbial alterations have been associated with therapeutic resistance, underscoring their potential impact on disease progression and treatment outcomes. This review summarizes the potential origins of intratumoral microorganisms and the microbiome alterations associated with distinct CCA subtypes. Crucially, we critically evaluate the methodological challenges inherent to low-biomass biliary samples—including contamination risks and confounding factors such as cholestasis and medical interventions—and distinguish between associative and causal evidence in current literature. Collectively, this work aims to provide a rigorous theoretical framework and novel insights for microbiome-based strategies in the early diagnosis and treatment of CCA.

## Linked entities

- **Diseases:** cholangiocarcinoma (MONDO:0019087)

## Full-text entities

- **Diseases:** malignancy (MESH:D009369), cholestasis (MESH:D002779), inflammation (MESH:D007249), CCA (MESH:D018281), Microbial dysbiosis (MESH:D064806)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12886488/full.md

## References

161 references — full list in the complete paper: https://tomesphere.com/paper/PMC12886488/full.md

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Source: https://tomesphere.com/paper/PMC12886488