# Differential gene expression in peripheral vascular smooth muscle cells of patients with peripheral artery disease

**Authors:** Dongoh Lee, Ji Hye Kim, Dong Yeon Lee

PMC · DOI: 10.1007/s10157-025-02774-w · Clinical and Experimental Nephrology · 2025-10-22

## TL;DR

This study explores gene expression differences in peripheral vascular smooth muscle cells from patients with peripheral artery disease and chronic kidney disease.

## Contribution

The study identifies novel gene expression patterns in peripheral vascular smooth muscle cells under calcifying conditions.

## Key findings

- Genes related to contractility (ACTA2, CALD1, CNN1, TAGLN) increased only in control cells.
- Genes related to synthetic phenotype (ICAM1, SPP1, MMP3, TIMP1) showed no significant changes.
- UNC5B was overexpressed in pathological peripheral VSMCs under calcifying conditions.

## Abstract

The role of peripheral vascular smooth muscle cells (VSMCs) in vascular calcification has been overlooked compared with that of the major VSMCs. This study aimed to investigate the differentially expressed genes (DEGs) of peripheral VSMCs in patients with critical limb ischemia (CLI) results from peripheral arterial disease and Chronic Kidney disease (CKD).

We isolated peripheral VSMCs from the posterior tibial artery of 6 patients with CKD who underwent below-knee amputation for CLI. Using normal human aortic VSMCs as a control, we cultured all samples in normal and high phosphate media for 10 days. Total RNA was extracted and analyzed using mRNA sequencing. Expression levels of genes related to contractile and synthetic phenotypes were examined. Bioinformatics analysis of the DEGs was performed.

All four genes (ACTA2, CALD1, CNN1, and TAGLN) related to the contractility phenotype increased only in the control group. The expression of all four genes (ICAM1, SPP1, MMP3, and TIMP1) related to the synthetic phenotype showed no significant changes or decreases in all samples. Several genes (SERTAD4, ITGA11, SPRN, IGFBP6, BCL2A1, APOE, TRABD2A, and FAM13B) showed significant changes under calcifying conditions. Only UNC5B expression showed an opposite pattern between normal human aortic VSMC and pathological peripheral VSMCs.

UNC5B was overexpressed only in pathologic peripheral VSMCs under calcifying conditions, whereas downregulated in normal aortic VSMCs. Further research on the effect of UNC5B on peripheral VSMC is warranted. (IRB number: H-1711-022-897).

## Linked entities

- **Genes:** ACTA2 (actin alpha 2, smooth muscle) [NCBI Gene 59], CALD1 (caldesmon 1) [NCBI Gene 800], CNN1 (calponin 1) [NCBI Gene 1264], TAGLN (transgelin) [NCBI Gene 6876], ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383], SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696], MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314], TIMP1 (TIMP metallopeptidase inhibitor 1) [NCBI Gene 7076], SERTAD4 (SERTA domain containing 4) [NCBI Gene 56256], ITGA11 (integrin subunit alpha 11) [NCBI Gene 22801], SPRN (shadow of prion protein) [NCBI Gene 503542], IGFBP6 (insulin like growth factor binding protein 6) [NCBI Gene 3489], BCL2A1 (BCL2 related protein A1) [NCBI Gene 597], APOE (apolipoprotein E) [NCBI Gene 348], TRABD2A (TraB domain containing 2A) [NCBI Gene 129293], FAM13B (family with sequence similarity 13 member B) [NCBI Gene 51306], UNC5B (unc-5 netrin receptor B) [NCBI Gene 219699]
- **Diseases:** Chronic Kidney disease (MONDO:0005300)

## Full-text entities

- **Genes:** MMP3 (matrix metallopeptidase 3) [NCBI Gene 4314] {aka CHDS6, MMP-3, SL-1, STMY, STMY1, STR1}, TRABD2A (TraB domain containing 2A) [NCBI Gene 129293] {aka C2orf89, TIKI1}, APOE (apolipoprotein E) [NCBI Gene 348] {aka AD2, APO-E, ApoE4, LDLCQ5, LPG}, BCL2A1 (BCL2 related protein A1) [NCBI Gene 597] {aka ACC-1, ACC-2, ACC1, ACC2, BCL2L5, BFL1}, FAM13B (family with sequence similarity 13 member B) [NCBI Gene 51306] {aka ARHGAP49, C5orf5, FAM13B1, KHCHP, N61}, ITGA11 (integrin subunit alpha 11) [NCBI Gene 22801] {aka HsT18964}, UNC5B (unc-5 netrin receptor B) [NCBI Gene 219699] {aka UNC5H2, p53RDL1}, CALD1 (caldesmon 1) [NCBI Gene 800] {aka CDM, H-CAD, HCAD, L-CAD, LCAD, NAG22}, ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383] {aka BB2, CD54, P3.58}, TAGLN (transgelin) [NCBI Gene 6876] {aka SM22, SM22-alpha, SMCC, TAGLN1, TGLN, WS3-10}, SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, SPRN (shadow of prion protein) [NCBI Gene 503542] {aka SHADOO, SHO, bA108K14.1}, IGFBP6 (insulin like growth factor binding protein 6) [NCBI Gene 3489] {aka IBP6}, CNN1 (calponin 1) [NCBI Gene 1264] {aka HEL-S-14, SMCC, Sm-Calp}, ACTA2 (actin alpha 2, smooth muscle) [NCBI Gene 59] {aka ACTSA, SMDYS}, TIMP1 (TIMP metallopeptidase inhibitor 1) [NCBI Gene 7076] {aka CLGI, EPA, EPO, HCI, TIMP, TIMP-1}, SERTAD4 (SERTA domain containing 4) [NCBI Gene 56256] {aka DJ667H12.2}
- **Diseases:** CLI (MESH:D000089802), CKD (MESH:D051436), vascular calcification (MESH:D061205), peripheral arterial disease (MESH:D058729)
- **Chemicals:** phosphate (MESH:D010710)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12886273/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12886273/full.md

---
Source: https://tomesphere.com/paper/PMC12886273